G107489


Basic Information

Item Value
gene id G107489
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4061178 ~ 4062165 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU121931
CTACACTAGGTGTTTTACCTCCTAACTGACAGGAAGGAGAATCAATCTCTCTCTACACTAGGTGTTTTACCTCCTAACTGACAGGAAGGAGAATCAACCTCTCTCTACACTAGGTGTTTTACCTCCTAACTGACAGGAAGGTGAATCAACCTCTCTCTACACTAGGTGTTTTACCTCCTAACTAACAGGAAGGTGAATCAACCTCTCTCTACACTAGGTGTTTTACCTCCTAACTAACAGGAAGGTGATTCAACCTCCCCCTACACTAGGTGTTTTACCTCCTAACTGACAGGAAGGTGAATCAACCTCTCTCTACACTAGGTGTTTTACCTCCTAACTGACAGGAAGGTGAATCAACCTCTCTCTACACTAGGTGTTTTACCCCCTAACTGACAGGAAGGTGAATCAACCTCTCTCTACACTAGGTGTTTTACCTCCTAACTGACAGGAAGGAGAATCAACCTCTCTCTACACTAGGTGTTTTACCCCCTAACTGACAGGAAGGTGAATCAACCTCTCCCTACACTAGGTGTTTTACCCCCTAACTGACAGGAAGGTGATTCAACCTATCTCTACAGTAGGTGTTTTACCTCCTAACTAACAGGAAGGTGAATCAACCTCTCTCTACACTAGGTGTTTTATCTCCTAACTGACAGTTTATAAATTAGGGGAAGTAAGTAGATTACCAACACAACACAGGTTGTTTTTATGACAGTTGGAACCGGAGGGCAATAATGTGTAGGTGTCACATTATCGTGTCACAAAATAGCTCAAGGATCTGAGATTTTCACTGAGATTGATTTGAAGGCTTTTCTCTTGACTTGATACAGCTTCATGAAATACCCTTTATTTTGCCACAGTTACCTGGGACAATAGTACCAACATAGTGTTTTTAAATAACCCAAATATGGAAATGTTTTGATTATTGTTAAGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121931 True 936 lncRNA 0.43 2 4061178 4062165

Neighbor

gene id symbol gene type direction distance location
LOC110520706 LOC106574239 coding downstream 73542 3940390 ~ 3987636 (-)
LOC110506163 LOC106574253 coding downstream 127558 3930634 ~ 3933620 (-)
LOC110506994 carmil1 coding downstream 136608 3705036 ~ 3924570 (-)
LOC110505062 LOC106572986 coding downstream 360164 3676265 ~ 3701014 (-)
LOC118937343 NA coding downstream 417891 3641294 ~ 3643287 (-)
enpp2 LOC106573026 coding upstream 60145 4122310 ~ 4167024 (-)
taf2 LOC106572977 coding upstream 108578 4170743 ~ 4223204 (-)
dscc1 LOC106595460 coding upstream 165117 4227282 ~ 4236792 (-)
mrpl13 LOC106606163 coding upstream 513272 4575437 ~ 4602797 (-)
sntb1 LOC106595750 coding upstream 600168 4662333 ~ 4740098 (-)
G107488 NA non-coding downstream 417 4059650 ~ 4060761 (-)
G107478 NA non-coding downstream 19964 4040285 ~ 4041214 (-)
G107477 NA non-coding downstream 21487 4039468 ~ 4039691 (-)
G107476 NA non-coding downstream 23203 4037629 ~ 4037975 (-)
G107472 NA non-coding downstream 26892 4033900 ~ 4034286 (-)
G107501 NA non-coding upstream 29756 4091921 ~ 4093983 (-)
G107510 NA non-coding upstream 45965 4108130 ~ 4108517 (-)
G107516 NA non-coding upstream 66084 4128249 ~ 4128598 (-)
G107517 NA non-coding upstream 68315 4130480 ~ 4132309 (-)
G107527 NA non-coding upstream 111810 4173975 ~ 4175752 (-)
G107456 NA other downstream 68331 3991326 ~ 3992847 (-)
G106003 NA other downstream 1576055 2483860 ~ 2485123 (-)
G106001 NA other downstream 1577822 2482941 ~ 2483356 (-)
G105938 NA other downstream 1697647 2362999 ~ 2363531 (-)
G107574 NA other upstream 233260 4295425 ~ 4296815 (-)
G107576 NA other upstream 235280 4297445 ~ 4302456 (-)
G107755 NA other upstream 313757 4375922 ~ 4376423 (-)
G107843 NA other upstream 477070 4539235 ~ 4539623 (-)
G107849 NA other upstream 488148 4550313 ~ 4551965 (-)

Expression


Co-expression Network