Gene
RNA
| Item | Value |
|---|---|
| gene id | G107501 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 4091921 ~ 4093983 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transcription factor Sp4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU121948 | True | 291 | lncRNA | 0.34 | 2 | 4091921 | 4093983 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520706 | LOC106574239 | coding | downstream | 104285 | 3940390 ~ 3987636 (-) |
| LOC110506163 | LOC106574253 | coding | downstream | 158301 | 3930634 ~ 3933620 (-) |
| LOC110506994 | carmil1 | coding | downstream | 167351 | 3705036 ~ 3924570 (-) |
| LOC110505062 | LOC106572986 | coding | downstream | 390907 | 3676265 ~ 3701014 (-) |
| LOC118937343 | NA | coding | downstream | 448634 | 3641294 ~ 3643287 (-) |
| enpp2 | LOC106573026 | coding | upstream | 28327 | 4122310 ~ 4167024 (-) |
| taf2 | LOC106572977 | coding | upstream | 76760 | 4170743 ~ 4223204 (-) |
| dscc1 | LOC106595460 | coding | upstream | 133299 | 4227282 ~ 4236792 (-) |
| mrpl13 | LOC106606163 | coding | upstream | 481454 | 4575437 ~ 4602797 (-) |
| sntb1 | LOC106595750 | coding | upstream | 568350 | 4662333 ~ 4740098 (-) |
| G107489 | NA | non-coding | downstream | 29756 | 4061178 ~ 4062165 (-) |
| G107488 | NA | non-coding | downstream | 31160 | 4059650 ~ 4060761 (-) |
| G107478 | NA | non-coding | downstream | 50707 | 4040285 ~ 4041214 (-) |
| G107477 | NA | non-coding | downstream | 52230 | 4039468 ~ 4039691 (-) |
| G107476 | NA | non-coding | downstream | 53946 | 4037629 ~ 4037975 (-) |
| G107510 | NA | non-coding | upstream | 14147 | 4108130 ~ 4108517 (-) |
| G107516 | NA | non-coding | upstream | 34266 | 4128249 ~ 4128598 (-) |
| G107517 | NA | non-coding | upstream | 36497 | 4130480 ~ 4132309 (-) |
| G107527 | NA | non-coding | upstream | 79992 | 4173975 ~ 4175752 (-) |
| G107528 | NA | non-coding | upstream | 86006 | 4179989 ~ 4181164 (-) |
| G107456 | NA | other | downstream | 99074 | 3991326 ~ 3992847 (-) |
| G106003 | NA | other | downstream | 1606798 | 2483860 ~ 2485123 (-) |
| G106001 | NA | other | downstream | 1608565 | 2482941 ~ 2483356 (-) |
| G105938 | NA | other | downstream | 1728390 | 2362999 ~ 2363531 (-) |
| G107574 | NA | other | upstream | 201442 | 4295425 ~ 4296815 (-) |
| G107576 | NA | other | upstream | 203462 | 4297445 ~ 4302456 (-) |
| G107755 | NA | other | upstream | 281939 | 4375922 ~ 4376423 (-) |
| G107843 | NA | other | upstream | 445252 | 4539235 ~ 4539623 (-) |
| G107849 | NA | other | upstream | 456330 | 4550313 ~ 4551965 (-) |
