G106797


Basic Information

Item Value
gene id G106797
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4095696 ~ 4096869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120895
gataccacattctatagactcttccattctaaagataccacattctatagatccttccattgtaaagataccacattctatagatccttccattgtaaagataccacattctatagactcttccattgtaaagataccacattctatagatccttccattgtaaagataccacattctatagatccttccattgtaaagataccacattctatagactcttccattgtaaagataccacattctatagat

Function

NR:

description
transcription factor Sp4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120895 True 250 lncRNA 0.49 2 4095696 4096869

Neighbor

gene id symbol gene type direction distance location
mal2 mal2 coding upstream 10016 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 30089 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 673597 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 1115503 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 1117172 2978236 ~ 2978524 (+)
LOC110507036 LOC106594376 coding downstream 16253 4113122 ~ 4119742 (+)
deptor deptor coding downstream 140011 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 231114 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 506089 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 537634 4634503 ~ 4636138 (+)
G106795 NA non-coding upstream 12204 4077278 ~ 4083492 (+)
G106793 NA non-coding upstream 41044 4054266 ~ 4054652 (+)
G106790 NA non-coding upstream 48072 4046707 ~ 4047624 (+)
G106773 NA non-coding upstream 69844 4025592 ~ 4025852 (+)
G106764 NA non-coding upstream 83157 4012139 ~ 4012539 (+)
G106814 NA non-coding downstream 40944 4137813 ~ 4138496 (+)
G106831 NA non-coding downstream 70851 4167720 ~ 4168317 (+)
G106806 NA non-coding downstream 89949 4186818 ~ 4189033 (+)
G106841 NA non-coding downstream 108571 4205440 ~ 4206012 (+)
G106842 NA non-coding downstream 109166 4206035 ~ 4206534 (+)
G106775 NA other upstream 68102 4027075 ~ 4027594 (+)
G106575 NA other upstream 295344 3639434 ~ 3800352 (+)
G106595 NA other upstream 417846 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 704663 3006312 ~ 3391033 (+)
G107922 NA other downstream 647299 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 711870 4808739 ~ 4811575 (+)
G108048 NA other downstream 761042 4857911 ~ 4858274 (+)
G108280 NA other downstream 1039487 5136356 ~ 5136992 (+)

Expression


Co-expression Network