G106814


Basic Information

Item Value
gene id G106814
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4137813 ~ 4138496 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120930
TAAATTAGACAACTGTTCAAATTAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAGTATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGGGTTTATCTTGAGAGGATTATTGAAGGAGCTGTTTTCCCTTGTCAAACATCAGTTATAAACACAGTAAATAGCATATAGCTGATATCAAAATAAACCAGGCAGGAAACATGTAGGCTGTGTCCTGTTTGACATACCTGTTTGGAGACTGTGTAGAATGC
>TU120937
TAAATTAGACAACTGTTCAAATTAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAGTATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGGGTTTATCTTGAGAGGATTATTGAAGGAGCTGTTTTCCCTTGTCAAACATCAGTTATAAACACAGTAAATAGCATATAGCTGATATCAAAATAAACCAGGCAGGAAACATGTAGGCTGTGTCCTGTTTGACATACCTGTTTGGAGACTGTGTAGAATGC
>TU120939
TAAATTAGACAACTGTTCAAATTAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAGTATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGGGTTTATCTTGAGAGGATTATTGAAGGAGCTGTTTTCCCTTGTCAAACATCAGTTATAAACACAGTAAATAGCATATAGCTGATATCAAAATAAACCAGGCAGGAAACATGTAGGCTGTGTCCTGTTTGACATACCTGTTTGGAGACTGTGTAGAATGC
>TU120940
TAAATTAGACAACTGTTCAAATTAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAGTATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGCAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGTTGAAATGAGTAGTCAACATAAAGTATTGACGAGGTATGTACCAGTCCATGGGTTTATCTTGAGAGGATTATTGAAGGAGCTGTTTTCCCTTGTCAAACATCAGTTATAAACACAGTAAATAGCATATAGCTGATATCAAAATAAACCAGGCAGGAAACATGTAGGCTGTGTCCTGTTTGACATACCTGTTTGGAGACTGTGTAGAATGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106575247 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120930 False 531 lncRNA 0.37 4 4137813 4138496
TU120937 False 582 TUCP 0.38 3 4137813 4138496
TU120939 False 531 lncRNA 0.38 3 4137813 4138496
TU120940 True 582 TUCP 0.38 2 4137813 4138496

Neighbor

gene id symbol gene type direction distance location
LOC110507036 LOC106594376 coding upstream 18071 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 52133 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 72206 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 715714 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 1157620 2978786 ~ 2980193 (+)
deptor deptor coding downstream 98384 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 189487 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 464462 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 496007 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 597161 4735246 ~ 4737284 (+)
G106797 NA non-coding upstream 40944 4095696 ~ 4096869 (+)
G106795 NA non-coding upstream 54321 4077278 ~ 4083492 (+)
G106793 NA non-coding upstream 83161 4054266 ~ 4054652 (+)
G106790 NA non-coding upstream 90189 4046707 ~ 4047624 (+)
G106773 NA non-coding upstream 111961 4025592 ~ 4025852 (+)
G106831 NA non-coding downstream 29224 4167720 ~ 4168317 (+)
G106806 NA non-coding downstream 48322 4186818 ~ 4189033 (+)
G106841 NA non-coding downstream 66944 4205440 ~ 4206012 (+)
G106842 NA non-coding downstream 67539 4206035 ~ 4206534 (+)
G106849 NA non-coding downstream 79879 4218375 ~ 4218891 (+)
G106775 NA other upstream 110219 4027075 ~ 4027594 (+)
G106575 NA other upstream 337461 3639434 ~ 3800352 (+)
G106595 NA other upstream 459963 3676265 ~ 3677850 (+)
G106253 cdkal other upstream 746780 3006312 ~ 3391033 (+)
G107922 NA other downstream 605672 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 670243 4808739 ~ 4811575 (+)
G108048 NA other downstream 719415 4857911 ~ 4858274 (+)
G108280 NA other downstream 997860 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 1157683 5296179 ~ 5299933 (+)

Expression


Co-expression Network