G106806


Basic Information

Item Value
gene id G106806
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4186818 ~ 4189033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120915
GTAGGAAGTAGCTCTGGAAGCTGATGAAGGTGTTGGTCTTGACGATGTTTGGACAGCTCTTACAGCAGAACATTCTGGTGAACAGAGACTTCATGGCTGGAGGACCGGTCCAGGTGCTCATCATGGAGTTGGCGATCTATGAATGTTTAAAACAGGAAACACATGATACAGCTTCCTCCTCCTGTTCTATCTGAGCTGATGTGTGACAGCtagctctcctcctcctgttctatcTGAGCTGATGTGTGACAGCTAGCTATCCTCCTCCTGTTCTATCTTAGCTGATGTGTGACAGCTAGCTCTCCTCCTGTTCTATCTGAGCTGATGTGTGACAGCTAGCTATCCTCCTCCTGTTCTATCTTAGCTGATGTGTGACAGCtagctctcctcctcctgttctatcTGAGCTGATGTGTGACAGCtagctctcctcctcctgttctatcTGAGCTGATGTGTGACAGCtagctctcctcctcctgttctatcTGAGCTGATGTGTGACAGCTAGCTCTCCTCCTGTTCTATCTGAGCTGATGTGTGACAGCtagctctcctcctcctgttctatcTGAGCTGATGTGTGACAGCTAGCTCTCCTCCTGTTCTATCTGAGCTGATGTGTGACAGCtagctctcctcctcctgttctatcTGAGCTGATGTGTGACAGCTAGCTATCCTGGTGAACAGGGACGTCACAGAGCAGTGGAGTTCGCTATGTAGACACAGAAGATACTAAATAATAGACGTATTAGCTAGTAATCTAACTAGGATGACACATGACACTCTGAAGGTggtttcctggacaaaacgttgtAATATTCATTTGAAAGTTAACTGCAAGGGGACAAGAGAGTGCAACTATGATTAGATTTTCTAGAGTTCAGAACAATTGGCTTCTAGCAGACTGGCTTCTAGCCTGTTACATTAGGAAGTAACAGAGCAgagggtctccctgctctctctcagcaGGATGTTAGAGAGAAGCACAGAGCCGAgggtctccctgctctctctcagcaggatgttagagagaaggacagagccgagggtctccctgctctctctcagcaggatattagagagaaggacagagctgagggtctccctgctctctctcagcaggatattagagagaaggacagagccgagggtctccctgctctctctcagcaggatgttagagagaaggacagagccgagggtctccctgctctctctcagcaggatattagagagaaggacagagctgAGG

Function

NR:

description
transcription initiation factor TFIID subunit 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120915 True 1258 lncRNA 0.49 2 4186818 4189033

Neighbor

gene id symbol gene type direction distance location
LOC110507036 LOC106594376 coding upstream 67076 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 101138 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 121211 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 764719 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 1206625 2978786 ~ 2980193 (+)
deptor deptor coding downstream 47847 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 138950 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 413925 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 445470 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 546624 4735246 ~ 4737284 (+)
G106831 NA non-coding upstream 18501 4167720 ~ 4168317 (+)
G106814 NA non-coding upstream 48322 4137813 ~ 4138496 (+)
G106797 NA non-coding upstream 89949 4095696 ~ 4096869 (+)
G106795 NA non-coding upstream 103326 4077278 ~ 4083492 (+)
G106793 NA non-coding upstream 132166 4054266 ~ 4054652 (+)
G106841 NA non-coding downstream 16407 4205440 ~ 4206012 (+)
G106842 NA non-coding downstream 17002 4206035 ~ 4206534 (+)
G106849 NA non-coding downstream 29342 4218375 ~ 4218891 (+)
G106851 NA non-coding downstream 30673 4219706 ~ 4220363 (+)
G106852 NA non-coding downstream 32501 4221534 ~ 4222247 (+)
G106775 NA other upstream 159224 4027075 ~ 4027594 (+)
G106575 NA other upstream 386466 3639434 ~ 3800352 (+)
G106595 NA other upstream 508968 3676265 ~ 3677850 (+)
G107922 NA other downstream 555135 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 619706 4808739 ~ 4811575 (+)
G108048 NA other downstream 668878 4857911 ~ 4858274 (+)
G108280 NA other downstream 947323 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 1107146 5296179 ~ 5299933 (+)

Expression


Co-expression Network