Gene
RNA
| Item | Value |
|---|---|
| gene id | G106851 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 4219706 ~ 4220363 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: transcription initiation factor TFIID subunit 2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU120993 | True | 576 | lncRNA | 0.47 | 2 | 4219706 | 4220363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110507036 | LOC106594376 | coding | upstream | 99964 | 4113122 ~ 4119742 (+) |
| mal2 | mal2 | coding | upstream | 134026 | 4065992 ~ 4085680 (+) |
| colec10 | LOC106591867 | coding | upstream | 154099 | 4050783 ~ 4065607 (+) |
| mboat1 | LOC106573215 | coding | upstream | 797607 | 3350582 ~ 3487129 (+) |
| LOC118937337 | NA | coding | upstream | 1239513 | 2978786 ~ 2980193 (+) |
| deptor | deptor | coding | downstream | 16517 | 4236880 ~ 4302536 (+) |
| col14a1a | col14a1 | coding | downstream | 107620 | 4327983 ~ 4572381 (+) |
| LOC110520696 | mtbp | coding | downstream | 382595 | 4602958 ~ 4654733 (+) |
| LOC118937359 | NA | coding | downstream | 414140 | 4634503 ~ 4636138 (+) |
| LOC118937361 | NA | coding | downstream | 515294 | 4735246 ~ 4737284 (+) |
| G106849 | NA | non-coding | upstream | 815 | 4218375 ~ 4218891 (+) |
| G106842 | NA | non-coding | upstream | 13172 | 4206035 ~ 4206534 (+) |
| G106841 | NA | non-coding | upstream | 13694 | 4205440 ~ 4206012 (+) |
| G106806 | NA | non-coding | upstream | 30673 | 4186818 ~ 4189033 (+) |
| G106831 | NA | non-coding | upstream | 51389 | 4167720 ~ 4168317 (+) |
| G106852 | NA | non-coding | downstream | 1171 | 4221534 ~ 4222247 (+) |
| G106855 | NA | non-coding | downstream | 2095 | 4222458 ~ 4223131 (+) |
| G106857 | NA | non-coding | downstream | 3753 | 4224116 ~ 4224594 (+) |
| G106859 | NA | non-coding | downstream | 5901 | 4226264 ~ 4226569 (+) |
| G106860 | dscc1 | non-coding | downstream | 6923 | 4227286 ~ 4232470 (+) |
| G106814 | NA | other | upstream | 81210 | 4137813 ~ 4138496 (+) |
| G106775 | NA | other | upstream | 192112 | 4027075 ~ 4027594 (+) |
| G106575 | NA | other | upstream | 419354 | 3639434 ~ 3800352 (+) |
| G106595 | NA | other | upstream | 541856 | 3676265 ~ 3677850 (+) |
| G107922 | NA | other | downstream | 523805 | 4744168 ~ 4745586 (+) |
| G107955 | LOC106592862 | other | downstream | 588376 | 4808739 ~ 4811575 (+) |
| G108048 | NA | other | downstream | 637548 | 4857911 ~ 4858274 (+) |
| G108280 | NA | other | downstream | 915993 | 5136356 ~ 5136992 (+) |
| G108354 | LOC106573122 | other | downstream | 1075816 | 5296179 ~ 5299933 (+) |
