G106857


Basic Information

Item Value
gene id G106857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4224116 ~ 4224594 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120999
ctagacttcctgacgggccgcccccaggtggtgaaggtaggaaacaacacctccacttcgctgatcctcaacacaggggtgcgtgctcagccccctcctgtattccctgttcacccatgactgcatggccacgcatgtctccaactcaatcatcaagtttgcagacgacacaacagtagtaggccggattaccaacaatgataagacagcctacagggaggaggtgagggccctcagagtgtggtgccaggaaaataacctgtcACTAAATGTCaagaaaacaaaggagatgatcgtggacttcagaaaacagcagagggagcagactgttaaatagccaccactagcccGTTAGAGGCTGCTGGCCTAAATACATACTGtcgacttgaaatcactggccactttaataatagaatACCAGTCACtttcataatgtttacatattttccatgactcatctcatatgtatatatatatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120999 True 479 lncRNA 0.47 1 4224116 4224594

Neighbor

gene id symbol gene type direction distance location
LOC110507036 LOC106594376 coding upstream 104374 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 138436 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 158509 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 802017 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 1243923 2978786 ~ 2980193 (+)
deptor deptor coding downstream 12286 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 103389 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 378364 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 409909 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 511063 4735246 ~ 4737284 (+)
G106855 NA non-coding upstream 985 4222458 ~ 4223131 (+)
G106852 NA non-coding upstream 1869 4221534 ~ 4222247 (+)
G106851 NA non-coding upstream 3753 4219706 ~ 4220363 (+)
G106849 NA non-coding upstream 5225 4218375 ~ 4218891 (+)
G106842 NA non-coding upstream 17582 4206035 ~ 4206534 (+)
G106859 NA non-coding downstream 1670 4226264 ~ 4226569 (+)
G106860 dscc1 non-coding downstream 2692 4227286 ~ 4232470 (+)
G106864 NA non-coding downstream 22145 4246739 ~ 4247242 (+)
G106868 NA non-coding downstream 28323 4252917 ~ 4253177 (+)
G106869 NA non-coding downstream 29508 4254102 ~ 4254936 (+)
G106814 NA other upstream 85620 4137813 ~ 4138496 (+)
G106775 NA other upstream 196522 4027075 ~ 4027594 (+)
G106575 NA other upstream 423764 3639434 ~ 3800352 (+)
G106595 NA other upstream 546266 3676265 ~ 3677850 (+)
G107922 NA other downstream 519574 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 584145 4808739 ~ 4811575 (+)
G108048 NA other downstream 633317 4857911 ~ 4858274 (+)
G108280 NA other downstream 911762 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 1071585 5296179 ~ 5299933 (+)

Expression


Co-expression Network