G106859


Basic Information

Item Value
gene id G106859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4226264 ~ 4226569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU121001
aagaatgatggaggccactttgttcttggggacattcaatgctgcagatgtttggtacccttccccagatctgtgcctcaacacaatcctgtctcagagctctacagacaattcctttgaccagatggcttggtttttgttctgtcatgcactatcaactgtaggaccttatatagacaggtgtgtgcctttacaaatcatgtccaatcaattgaacttagcaccggtggactccaatcaagttgtaaaaacatcacggaacaatggaaacaggatgcacccgagttcaatttcaagtctcatagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121001 True 306 lncRNA 0.39 1 4226264 4226569

Neighbor

gene id symbol gene type direction distance location
LOC110507036 LOC106594376 coding upstream 106522 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 140584 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 160657 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 804165 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 1246071 2978786 ~ 2980193 (+)
deptor deptor coding downstream 10311 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 101414 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 376389 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 407934 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 509088 4735246 ~ 4737284 (+)
G106857 NA non-coding upstream 1670 4224116 ~ 4224594 (+)
G106855 NA non-coding upstream 3133 4222458 ~ 4223131 (+)
G106852 NA non-coding upstream 4017 4221534 ~ 4222247 (+)
G106851 NA non-coding upstream 5901 4219706 ~ 4220363 (+)
G106849 NA non-coding upstream 7373 4218375 ~ 4218891 (+)
G106860 dscc1 non-coding downstream 717 4227286 ~ 4232470 (+)
G106864 NA non-coding downstream 20170 4246739 ~ 4247242 (+)
G106868 NA non-coding downstream 26348 4252917 ~ 4253177 (+)
G106869 NA non-coding downstream 27533 4254102 ~ 4254936 (+)
G106814 NA other upstream 87768 4137813 ~ 4138496 (+)
G106775 NA other upstream 198670 4027075 ~ 4027594 (+)
G106575 NA other upstream 425912 3639434 ~ 3800352 (+)
G106595 NA other upstream 548414 3676265 ~ 3677850 (+)
G107922 NA other downstream 517599 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 582170 4808739 ~ 4811575 (+)
G108048 NA other downstream 631342 4857911 ~ 4858274 (+)
G108280 NA other downstream 909787 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 1069610 5296179 ~ 5299933 (+)

Expression


Co-expression Network