Gene
RNA
| Item | Value |
|---|---|
| gene id | G107564 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 4277511 ~ 4278065 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Repetin, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU122052 | True | 555 | lncRNA | 0.44 | 1 | 4277511 | 4278065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dscc1 | LOC106595460 | coding | downstream | 40719 | 4227282 ~ 4236792 (-) |
| taf2 | LOC106572977 | coding | downstream | 54307 | 4170743 ~ 4223204 (-) |
| enpp2 | LOC106573026 | coding | downstream | 110487 | 4122310 ~ 4167024 (-) |
| LOC110520706 | LOC106574239 | coding | downstream | 289875 | 3940390 ~ 3987636 (-) |
| LOC110506163 | LOC106574253 | coding | downstream | 343891 | 3930634 ~ 3933620 (-) |
| mrpl13 | LOC106606163 | coding | upstream | 297372 | 4575437 ~ 4602797 (-) |
| sntb1 | LOC106595750 | coding | upstream | 384268 | 4662333 ~ 4740098 (-) |
| has2 | LOC106592862 | coding | upstream | 530648 | 4808713 ~ 4841402 (-) |
| LOC118936926 | LOC106594463 | coding | upstream | 788907 | 5066972 ~ 5068112 (-) |
| LOC118944032 | NA | coding | upstream | 864864 | 5142929 ~ 5164600 (-) |
| G107563 | NA | non-coding | downstream | 177 | 4276881 ~ 4277334 (-) |
| G107562 | NA | non-coding | downstream | 1176 | 4274524 ~ 4276335 (-) |
| G107560 | NA | non-coding | downstream | 7458 | 4268201 ~ 4270053 (-) |
| G107556 | NA | non-coding | downstream | 14605 | 4261533 ~ 4262906 (-) |
| G107551 | NA | non-coding | downstream | 27750 | 4249307 ~ 4249761 (-) |
| G107565 | NA | non-coding | upstream | 94 | 4278159 ~ 4278476 (-) |
| G107566 | NA | non-coding | upstream | 471 | 4278536 ~ 4278763 (-) |
| G107568 | NA | non-coding | upstream | 3704 | 4281769 ~ 4282850 (-) |
| G107569 | NA | non-coding | upstream | 5224 | 4283289 ~ 4283721 (-) |
| G107571 | NA | non-coding | upstream | 8913 | 4286978 ~ 4287373 (-) |
| G107456 | NA | other | downstream | 284664 | 3991326 ~ 3992847 (-) |
| LOC110506994 | carmil1 | other | downstream | 501333 | 3705036 ~ 3924570 (-) |
| G106003 | NA | other | downstream | 1792388 | 2483860 ~ 2485123 (-) |
| G106001 | NA | other | downstream | 1794155 | 2482941 ~ 2483356 (-) |
| G105938 | NA | other | downstream | 1913980 | 2362999 ~ 2363531 (-) |
| G107574 | NA | other | upstream | 17360 | 4295425 ~ 4296815 (-) |
| G107576 | NA | other | upstream | 19380 | 4297445 ~ 4302456 (-) |
| G107755 | NA | other | upstream | 97857 | 4375922 ~ 4376423 (-) |
| G107843 | NA | other | upstream | 261170 | 4539235 ~ 4539623 (-) |
| G107849 | NA | other | upstream | 272248 | 4550313 ~ 4551965 (-) |
