G107582


Basic Information

Item Value
gene id G107582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4306188 ~ 4306575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122102
catacttccaaagttgtggccaaatggcttaaggaccgcaaagtcaaggtattggagtggccatcacaaagccctgacctcaaccctatagaaattttgtgggcagaactgaaaaagcgtgtgcgagcaaggaggcctacaaacctaactcagttacaccagctctgtcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgtggaaggctacccgaaatgtttgacccaagttaaacaatttcaaggcaatgctaccgaatactaattgagtgtatgtaaacttctgacccactgagaatgtgatgaaagaaataaaagctgaaataaatcattctctctactattattctgacatgaaatgttcttaaaataaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122102 True 388 lncRNA 0.41 1 4306188 4306575

Neighbor

gene id symbol gene type direction distance location
deptor deptor coding upstream 3652 4236880 ~ 4302536 (+)
LOC110507036 LOC106594376 coding upstream 186446 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 220508 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 240581 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 884089 3350582 ~ 3487129 (+)
col14a1a col14a1 coding downstream 21408 4327983 ~ 4572381 (+)
LOC110520696 mtbp coding downstream 296383 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 327928 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 429082 4735246 ~ 4737284 (+)
LOC110506140 LOC106606110 coding downstream 841526 5148101 ~ 5176987 (+)
G107581 NA non-coding upstream 189 4305709 ~ 4305999 (+)
G107580 NA non-coding upstream 615 4305312 ~ 4305573 (+)
G106869 NA non-coding upstream 51252 4254102 ~ 4254936 (+)
G106868 NA non-coding upstream 53011 4252917 ~ 4253177 (+)
G107611 NA non-coding downstream 42292 4348867 ~ 4349162 (+)
G107612 NA non-coding downstream 46666 4353241 ~ 4353525 (+)
G107613 NA non-coding downstream 47009 4353584 ~ 4353832 (+)
G107614 NA non-coding downstream 48454 4355029 ~ 4355288 (+)
G107618 NA non-coding downstream 57896 4364471 ~ 4364708 (+)
G106814 NA other upstream 167692 4137813 ~ 4138496 (+)
G106775 NA other upstream 278594 4027075 ~ 4027594 (+)
G106575 NA other upstream 505836 3639434 ~ 3800352 (+)
G106595 NA other upstream 628338 3676265 ~ 3677850 (+)
G107922 NA other downstream 437593 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 502164 4808739 ~ 4811575 (+)
G108048 NA other downstream 551336 4857911 ~ 4858274 (+)
G108280 NA other downstream 829781 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 989604 5296179 ~ 5299933 (+)

Expression


Co-expression Network