G107738


Basic Information

Item Value
gene id G107738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4350963 ~ 4351669 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122318
GTATTATACCTCATTagtcccagagacagagagctcaACAGGAACAGTATTATACCTCATTAgtcccagagacagagagttcaacAGGAATAGTATTATACCTCATTAGtcctagagacagagagctcaACAGGAATAGTATTATACCTCATTAGTCCCAGCGACAGAGAGCTCAACAGGAATAGTATTATACCTCATtagacccagagacagagagcccAACAGGAATAGTATTATACCTCATTagtcccagagacagagagctcaACAGGAACAGTATTATACCTCATTagtcccagagacagagagctcaACAGGAACAGTATTATACCTCATtagacccaACAGGAATAGTATTATACCTCATTagtcccagagacagagagctcaACAGGAACAGTATTATACCTCATTagtcccagagacagagagctcaACAGGAACAGTATTATACCTCATTagtcccagagacagagagctcaACAGGAATAGTATTATACCTCATTagtcccagagacagagagcccAACAGGAATAGTATTATACCTCATtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122318 True 554 lncRNA 0.48 2 4350963 4351669

Neighbor

gene id symbol gene type direction distance location
dscc1 LOC106595460 coding downstream 114171 4227282 ~ 4236792 (-)
taf2 LOC106572977 coding downstream 127759 4170743 ~ 4223204 (-)
enpp2 LOC106573026 coding downstream 183939 4122310 ~ 4167024 (-)
LOC110520706 LOC106574239 coding downstream 363327 3940390 ~ 3987636 (-)
LOC110506163 LOC106574253 coding downstream 417343 3930634 ~ 3933620 (-)
mrpl13 LOC106606163 coding upstream 223768 4575437 ~ 4602797 (-)
sntb1 LOC106595750 coding upstream 310664 4662333 ~ 4740098 (-)
has2 LOC106592862 coding upstream 457044 4808713 ~ 4841402 (-)
LOC118936926 LOC106594463 coding upstream 715303 5066972 ~ 5068112 (-)
LOC118944032 NA coding upstream 791260 5142929 ~ 5164600 (-)
G107737 NA non-coding downstream 184 4350361 ~ 4350779 (-)
G107736 NA non-coding downstream 2734 4348002 ~ 4348229 (-)
G107730 NA non-coding downstream 16012 4334661 ~ 4334951 (-)
G107591 NA non-coding downstream 31602 4318871 ~ 4319361 (-)
G107588 NA non-coding downstream 37176 4313537 ~ 4313787 (-)
G107742 NA non-coding upstream 4578 4356247 ~ 4357103 (-)
G107748 NA non-coding upstream 16944 4368613 ~ 4368863 (-)
G107750 NA non-coding upstream 18788 4370457 ~ 4370829 (-)
G107754 NA non-coding upstream 23222 4374891 ~ 4375108 (-)
G107756 NA non-coding upstream 27877 4379546 ~ 4380976 (-)
G107576 NA other downstream 50733 4297445 ~ 4302456 (-)
G107574 NA other downstream 54148 4295425 ~ 4296815 (-)
G107456 NA other downstream 358116 3991326 ~ 3992847 (-)
LOC110506994 carmil1 other downstream 574785 3705036 ~ 3924570 (-)
G106003 NA other downstream 1865840 2483860 ~ 2485123 (-)
G107755 NA other upstream 24253 4375922 ~ 4376423 (-)
G107843 NA other upstream 187566 4539235 ~ 4539623 (-)
G107849 NA other upstream 198644 4550313 ~ 4551965 (-)
G108033 NA other upstream 491392 4843061 ~ 4844091 (-)
G108477 NA other upstream 888949 5240618 ~ 5241664 (-)

Expression


Co-expression Network