G107613


Basic Information

Item Value
gene id G107613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4353584 ~ 4353832 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122159
gtatTTTGCCACATTGGTTATGGTTACATCATAATGATTTCCTTTTGCCATTTGTTTGATACAAAAGGTTACATTAGACTTGTTTCAATTTCCAGAACGTCTAATACCCTTTAATTAAAAGTGCAATTTCTCTGATCTTGATCgtgctgtttcctgtttcctgttggtGCTTCAGCATTAATCTGCTGAGTCATCACTTCCAAATGCTAGATCCATCCCCTAAATctccctcctctgttctctctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122159 True 249 lncRNA 0.38 1 4353584 4353832

Neighbor

gene id symbol gene type direction distance location
deptor deptor coding upstream 51048 4236880 ~ 4302536 (+)
LOC110507036 LOC106594376 coding upstream 233842 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 267904 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 287977 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 931485 3350582 ~ 3487129 (+)
LOC110520696 mtbp coding downstream 249126 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 280671 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 381825 4735246 ~ 4737284 (+)
LOC110506140 LOC106606110 coding downstream 794269 5148101 ~ 5176987 (+)
tbc1d31 tbc1d31 coding downstream 842099 5195931 ~ 5227041 (+)
G107612 NA non-coding upstream 59 4353241 ~ 4353525 (+)
G107611 NA non-coding upstream 4422 4348867 ~ 4349162 (+)
G107582 NA non-coding upstream 47009 4306188 ~ 4306575 (+)
G107581 NA non-coding upstream 47585 4305709 ~ 4305999 (+)
G107580 NA non-coding upstream 48011 4305312 ~ 4305573 (+)
G107614 NA non-coding downstream 1197 4355029 ~ 4355288 (+)
G107618 NA non-coding downstream 10639 4364471 ~ 4364708 (+)
G107625 NA non-coding downstream 25026 4378858 ~ 4379314 (+)
G107627 NA non-coding downstream 28766 4382598 ~ 4383867 (+)
G107632 NA non-coding downstream 33695 4387527 ~ 4388933 (+)
G106814 NA other upstream 215088 4137813 ~ 4138496 (+)
G106775 NA other upstream 325990 4027075 ~ 4027594 (+)
G106575 NA other upstream 553232 3639434 ~ 3800352 (+)
G106595 NA other upstream 675734 3676265 ~ 3677850 (+)
G107922 NA other downstream 390336 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 454907 4808739 ~ 4811575 (+)
G108048 NA other downstream 504079 4857911 ~ 4858274 (+)
G108280 NA other downstream 782524 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 942347 5296179 ~ 5299933 (+)

Expression


Co-expression Network