G107760



Basic Information


Item Value
gene id G107760
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4384617 ~ 4494189 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU122347
agagagagagagacacagagagagagacaaaaggagagagacaaaaagagagaaagacacaggagagagagagaaagagagattttaTAAACACAATCACGATGACAGAAGAACATCACCAGCACATCATTATCACCATTACCATCACACGATCACAATCAAataactatcaaatcaaatcactatcacatcaaacacatcaaatcactatcaaatcaaacacatcaAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU122347 True 229 lncRNA 0.36 3 4384617 4494189

Neighbor


gene id symbol gene type direction distance location
dscc1 LOC106595460 coding downstream 147825 4227282 ~ 4236792 (-)
taf2 LOC106572977 coding downstream 161413 4170743 ~ 4223204 (-)
enpp2 LOC106573026 coding downstream 217593 4122310 ~ 4167024 (-)
LOC110520706 LOC106574239 coding downstream 396981 3940390 ~ 3987636 (-)
LOC110506163 LOC106574253 coding downstream 450997 3930634 ~ 3933620 (-)
mrpl13 LOC106606163 coding upstream 81248 4575437 ~ 4602797 (-)
sntb1 LOC106595750 coding upstream 168144 4662333 ~ 4740098 (-)
has2 LOC106592862 coding upstream 314524 4808713 ~ 4841402 (-)
LOC118936926 LOC106594463 coding upstream 572783 5066972 ~ 5068112 (-)
LOC118944032 NA coding upstream 648740 5142929 ~ 5164600 (-)
G107756 NA non-coding downstream 3641 4379546 ~ 4380976 (-)
G107754 NA non-coding downstream 9509 4374891 ~ 4375108 (-)
G107750 NA non-coding downstream 13788 4370457 ~ 4370829 (-)
G107748 NA non-coding downstream 15754 4368613 ~ 4368863 (-)
G107742 NA non-coding downstream 27514 4356247 ~ 4357103 (-)
G107823 NA non-coding upstream 12023 4506212 ~ 4506706 (-)
G107833 NA non-coding upstream 30631 4524820 ~ 4525612 (-)
G107835 NA non-coding upstream 32614 4526803 ~ 4527084 (-)
G107841 NA non-coding upstream 42710 4536899 ~ 4537836 (-)
G107851 NA non-coding upstream 59452 4553641 ~ 4553890 (-)
G107755 NA other downstream 8194 4375922 ~ 4376423 (-)
G107576 NA other downstream 84387 4297445 ~ 4302456 (-)
G107574 NA other downstream 87802 4295425 ~ 4296815 (-)
G107456 NA other downstream 391770 3991326 ~ 3992847 (-)
LOC110506994 carmil1 other downstream 608439 3705036 ~ 3924570 (-)
G107843 NA other upstream 45046 4539235 ~ 4539623 (-)
G107849 NA other upstream 56124 4550313 ~ 4551965 (-)
G108033 NA other upstream 348872 4843061 ~ 4844091 (-)
G108477 NA other upstream 746429 5240618 ~ 5241664 (-)
LOC110520858 LOC106606136 other upstream 928308 5422229 ~ 5430785 (-)

Expression



Co-expression Network