Gene
RNA
| Item | Value |
|---|---|
| gene id | G107791 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 4430646 ~ 4431940 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| collagen alpha-1(XIV) chain-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU122397 | True | 609 | lncRNA | 0.51 | 3 | 4430646 | 4431940 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dscc1 | LOC106595460 | coding | downstream | 193854 | 4227282 ~ 4236792 (-) |
| taf2 | LOC106572977 | coding | downstream | 207442 | 4170743 ~ 4223204 (-) |
| enpp2 | LOC106573026 | coding | downstream | 263622 | 4122310 ~ 4167024 (-) |
| LOC110520706 | LOC106574239 | coding | downstream | 443010 | 3940390 ~ 3987636 (-) |
| LOC110506163 | LOC106574253 | coding | downstream | 497026 | 3930634 ~ 3933620 (-) |
| mrpl13 | LOC106606163 | coding | upstream | 143497 | 4575437 ~ 4602797 (-) |
| sntb1 | LOC106595750 | coding | upstream | 230393 | 4662333 ~ 4740098 (-) |
| has2 | LOC106592862 | coding | upstream | 376773 | 4808713 ~ 4841402 (-) |
| LOC118936926 | LOC106594463 | coding | upstream | 635032 | 5066972 ~ 5068112 (-) |
| LOC118944032 | NA | coding | upstream | 710989 | 5142929 ~ 5164600 (-) |
| G107784 | NA | non-coding | downstream | 9318 | 4420277 ~ 4421328 (-) |
| G107783 | NA | non-coding | downstream | 10455 | 4419061 ~ 4420191 (-) |
| G107782 | NA | non-coding | downstream | 11859 | 4418094 ~ 4418787 (-) |
| G107776 | NA | non-coding | downstream | 18435 | 4411190 ~ 4412211 (-) |
| G107766 | NA | non-coding | downstream | 35355 | 4393934 ~ 4395291 (-) |
| G107804 | NA | non-coding | upstream | 22314 | 4454254 ~ 4455350 (-) |
| G107805 | NA | non-coding | upstream | 23570 | 4455510 ~ 4456381 (-) |
| G107807 | NA | non-coding | upstream | 29422 | 4461362 ~ 4462146 (-) |
| G107823 | NA | non-coding | upstream | 74272 | 4506212 ~ 4506706 (-) |
| G107833 | NA | non-coding | upstream | 92880 | 4524820 ~ 4525612 (-) |
| G107755 | NA | other | downstream | 54223 | 4375922 ~ 4376423 (-) |
| G107576 | NA | other | downstream | 130416 | 4297445 ~ 4302456 (-) |
| G107574 | NA | other | downstream | 133831 | 4295425 ~ 4296815 (-) |
| G107456 | NA | other | downstream | 437799 | 3991326 ~ 3992847 (-) |
| LOC110506994 | carmil1 | other | downstream | 654468 | 3705036 ~ 3924570 (-) |
| G107843 | NA | other | upstream | 107295 | 4539235 ~ 4539623 (-) |
| G107849 | NA | other | upstream | 118373 | 4550313 ~ 4551965 (-) |
| G108033 | NA | other | upstream | 411121 | 4843061 ~ 4844091 (-) |
| G108477 | NA | other | upstream | 808678 | 5240618 ~ 5241664 (-) |
| LOC110520858 | LOC106606136 | other | upstream | 990557 | 5422229 ~ 5430785 (-) |
