G107807


Basic Information

Item Value
gene id G107807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4461362 ~ 4462146 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122422
CTGGTAAGCCTCATATTGtcagtctcattacaacaggccagCTGGTAAGCCTCATATTGtcagtctcattacaacaggccagCTGGTAAGCCTCATATTGtcagtctcattacaacaggccagCTGGTAAGCCTCATATTGtcagtctcattacaacaggccagCTGGTAAGCCTCATATTGtcagtctcattacaacaggccagCTGGTAAGCCTCATATCTtcagtctcattacaacaggccagCTGGTAAGCCTCATATCTtcagtctcattacaacaggccagCTGGTAAGCCTCATATCTtcagtctcattacaacaggccagCTGGTAAGCCTCATATCTtcagtctcattacaacaggccagCTGGTAAGCCTCATATCTtcagtctcattacaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122422 True 403 lncRNA 0.46 2 4461362 4462146

Neighbor

gene id symbol gene type direction distance location
dscc1 LOC106595460 coding downstream 224570 4227282 ~ 4236792 (-)
taf2 LOC106572977 coding downstream 238158 4170743 ~ 4223204 (-)
enpp2 LOC106573026 coding downstream 294338 4122310 ~ 4167024 (-)
LOC110520706 LOC106574239 coding downstream 473726 3940390 ~ 3987636 (-)
LOC110506163 LOC106574253 coding downstream 527742 3930634 ~ 3933620 (-)
mrpl13 LOC106606163 coding upstream 113291 4575437 ~ 4602797 (-)
sntb1 LOC106595750 coding upstream 200187 4662333 ~ 4740098 (-)
has2 LOC106592862 coding upstream 346567 4808713 ~ 4841402 (-)
LOC118936926 LOC106594463 coding upstream 604826 5066972 ~ 5068112 (-)
LOC118944032 NA coding upstream 680783 5142929 ~ 5164600 (-)
G107805 NA non-coding downstream 4981 4455510 ~ 4456381 (-)
G107804 NA non-coding downstream 6012 4454254 ~ 4455350 (-)
G107791 NA non-coding downstream 29422 4430646 ~ 4431940 (-)
G107784 NA non-coding downstream 40034 4420277 ~ 4421328 (-)
G107783 NA non-coding downstream 41171 4419061 ~ 4420191 (-)
G107823 NA non-coding upstream 44066 4506212 ~ 4506706 (-)
G107833 NA non-coding upstream 62674 4524820 ~ 4525612 (-)
G107835 NA non-coding upstream 64657 4526803 ~ 4527084 (-)
G107841 NA non-coding upstream 74753 4536899 ~ 4537836 (-)
G107851 NA non-coding upstream 91495 4553641 ~ 4553890 (-)
G107755 NA other downstream 84939 4375922 ~ 4376423 (-)
G107576 NA other downstream 161132 4297445 ~ 4302456 (-)
G107574 NA other downstream 164547 4295425 ~ 4296815 (-)
G107456 NA other downstream 468515 3991326 ~ 3992847 (-)
LOC110506994 carmil1 other downstream 685184 3705036 ~ 3924570 (-)
G107843 NA other upstream 77089 4539235 ~ 4539623 (-)
G107849 NA other upstream 88167 4550313 ~ 4551965 (-)
G108033 NA other upstream 380915 4843061 ~ 4844091 (-)
G108477 NA other upstream 778472 5240618 ~ 5241664 (-)
LOC110520858 LOC106606136 other upstream 960351 5422229 ~ 5430785 (-)

Expression


Co-expression Network