G107680


Basic Information

Item Value
gene id G107680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4526567 ~ 4527074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122243
ctttgcctctctctgtctctcaccatcACACCTGTGGAACATTCATTACAGAGGtctttgcctctctctgtctctcaccatcACACCTCCGGAACATCCATTACAGAGctctttgcctctctctgtctctcaccatcACACCTCCGGAACATCCATTACAGAGGTCTTTGCCTCTCTATTTCTTTCACCATCACACCTCCGGAACATCCATTAAAGAGGtctttgcctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122243 True 233 lncRNA 0.48 2 4526567 4527074

Neighbor

gene id symbol gene type direction distance location
deptor deptor coding upstream 224031 4236880 ~ 4302536 (+)
LOC110507036 LOC106594376 coding upstream 406825 4113122 ~ 4119742 (+)
mal2 mal2 coding upstream 440887 4065992 ~ 4085680 (+)
colec10 LOC106591867 coding upstream 460960 4050783 ~ 4065607 (+)
mboat1 LOC106573215 coding upstream 1104468 3350582 ~ 3487129 (+)
LOC110520696 mtbp coding downstream 75884 4602958 ~ 4654733 (+)
LOC118937359 NA coding downstream 107429 4634503 ~ 4636138 (+)
LOC118937361 NA coding downstream 208583 4735246 ~ 4737284 (+)
LOC110506140 LOC106606110 coding downstream 621027 5148101 ~ 5176987 (+)
tbc1d31 tbc1d31 coding downstream 668857 5195931 ~ 5227041 (+)
G107664 NA non-coding upstream 60403 4464960 ~ 4466164 (+)
G107645 NA non-coding upstream 110510 4414375 ~ 4416057 (+)
G107632 NA non-coding upstream 137634 4387527 ~ 4388933 (+)
G107627 NA non-coding upstream 142700 4382598 ~ 4383867 (+)
G107625 NA non-coding upstream 147253 4378858 ~ 4379314 (+)
G107682 NA non-coding downstream 12562 4539636 ~ 4541278 (+)
G107693 NA non-coding downstream 54242 4581316 ~ 4581677 (+)
G107697 NA non-coding downstream 69112 4596186 ~ 4599513 (+)
G107703 NA non-coding downstream 88464 4615538 ~ 4616062 (+)
G107709 NA non-coding downstream 111402 4638476 ~ 4640436 (+)
G106814 NA other upstream 388071 4137813 ~ 4138496 (+)
G106775 NA other upstream 498973 4027075 ~ 4027594 (+)
G106575 NA other upstream 726215 3639434 ~ 3800352 (+)
G106595 NA other upstream 848717 3676265 ~ 3677850 (+)
G107922 NA other downstream 217094 4744168 ~ 4745586 (+)
G107955 LOC106592862 other downstream 281665 4808739 ~ 4811575 (+)
G108048 NA other downstream 330837 4857911 ~ 4858274 (+)
G108280 NA other downstream 609282 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 769105 5296179 ~ 5299933 (+)

Expression


Co-expression Network