XLOC_020830


Basic Information

Item Value
gene id XLOC_020830
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 6563646 ~ 6565961 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041938
ATTAGTGAGTGTCTCATTTCTGCCCTGCTTTTATGGAAAGCAGTGGTTTGaaTGAATATGATATTATTCCATTTGTAAAATTAAGCTGCTCGTTCTCATCATCGGGAATAGGGtctaaaaaaacaatgaaatataaGGAATATCAGAAAATTATCAGGAAAAGAAATAAAGCTTCTTAGAATTCTCAGGAAAATCTTGAGATCAGGAGCAAAAATTAGATAGCAGAAAGAAAGAGCTGAAACCAGAAGAATAATTAaacctaataaaaaaaagatattggtGAAAATATTGCTCTACCTTAGGCAAGGAAACACATT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041938 True 317 lncRNA 0.32 2 6563646 6565961

Neighbor

gene id symbol gene type direction distance location
XLOC_020829 zgc:171490 coding downstream 1028 6546697 ~ 6562618 (-)
XLOC_020828 CR352226.5 coding downstream 34269 6527414 ~ 6529377 (-)
XLOC_020827 CR352226.4 coding downstream 43620 6515397 ~ 6520026 (-)
XLOC_020826 si:dkey-19a16.7 coding downstream 64569 6487048 ~ 6499077 (-)
XLOC_020825 CR926879.1 coding downstream 87388 6476142 ~ 6476258 (-)
XLOC_020831 CR352226.2 coding upstream 21589 6587550 ~ 6601587 (-)
XLOC_020832 si:ch211-209l18.4 coding upstream 66741 6632702 ~ 6651382 (-)
XLOC_020833 CR352226.3 coding upstream 95751 6661712 ~ 6662906 (-)
XLOC_020834 NA coding upstream 130556 6696517 ~ 6711516 (-)
XLOC_020835 NA coding upstream 161579 6727540 ~ 6753026 (-)
XLOC_020821 NA non-coding downstream 163929 6397413 ~ 6399717 (-)
XLOC_020818 AL928685.2 non-coding downstream 246667 6300311 ~ 6316979 (-)
XLOC_020838 FO904898.6 non-coding upstream 243405 6809366 ~ 6818528 (-)

Expression


Co-expression Network