G107955 (LOC106592862)


Basic Information

Item Value
gene id G107955
gene name LOC106592862
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4808739 ~ 4811575 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122673
CACAACACAAAAGTGCTTCAGGATAATACTACCCATGATCCCAAAATCACGGTTCAATATTCGGTCTGATCAATTCtaataaaatggattaaaatgtgTTCTTAAACTCTCTAAAGAGTCAATAATCAATAATCAATACTCTGGAATAGATCATTACATTTTTTGCGAAAATGTATCTTTTGGGATTTTAATCTGATGTGGATTAACGCATTGTTTATACAATTTTCAGAACGCATCATGTGACGAAAGTCCTCATGTGTATGAAACCTTGAAACCTATTTCAGGAAGTCCTACAGTAAGGCAAGAGGTGGTCAAAACCGCCGCCTGAAGAGATACTGCGTGGCAGGCTTTTGCTCCTGCCCTGCAGtaacagttagcctggtcccagatcagtttgtgctgatCAGTAGATTAGAGTGTGTTagagctagcctggtcccagatcagtttgtgctgatCAGTGAATTAGAGTGTGTTagagctagcctggtcccagatcagtttctGCTGATCAGTAGATTAGAGTGTGTTagagctagcctggtcccagattagTTTGTGCTGATCGGTAAATTAGAGTGTGTTagagctagcctggtcccaagatctgtttgtgctgtcttgctcATTTAGATTTGCGAAAGGCTATGTTAAGATTAGGGCTGGAGCAAAATCCTGCAGAACGGCTACCTCTCCAAAACCAACGATGGTCTCTATAAGGTCTATTATGAAATGTATATTATCAAATATATAATTATCTATAAACCACAGAATCTTCTTATAAATATTGCTGGTTTTCTCTCAATGTACATAAAAAAACACACAGGTTAATCACCCTTCTTGTATTCAATAACTTATCCCTAGAATTGCATTTTATTGTTATCATTGCAGACAAAAACCCAGCTGTTAACTTCACATTTTTGGTCAGATACACACATCATTGTTATAACAGTTGAATGCACAATGCATTTTTTATCTCTccattttatataaaaaaaatgaatgaaaataaagAATCTTTGGTGTTTATTAAAGCAAAAATAGAAtttaaaaaaagtctatataaaaAGGCATTAAAATATAATATGTAAATTACAAAGTAACACGTCAACAGATACAGCATGGCCAAGGAACTGAGAAATTCCAGCTTTGACTTTCATTAACAACTGTGTATAAAAAAAGAGGACAAATATGACCAAAAAAACATCATAAATTATGTTATAATCGAGAACGAGCCATTTTCTGGGTGCTTCCCGATCACTCACTCATACAATGAAAAGCATACCCACTGAGGTATTTCATCTTCAAATGACTCTGTCAAGCATTATGCACAATGGGAGTGAGACTTTAAAAGTGCATAGGACATTATGCACATCATCtctgtgtatctatgtggaaAAAACAGGATGTCCATTTGGTGGTTTTCCATTTGGCAAAACACATCACCAACAAGTGTTTTTTTACCTCATCATCATAATATTTCAGAAGGAAATATCTGTAGTTTCTTGTTGCAGTCAGTCACAGCAGCAATGATATCGCTCTTCTGGCATCGTCACTTCACGTCACCTGCCGAGAGTCCAACAATCAATGAGCAGTTTGAGATTCTTCACTTTGTAAACGTTGAGAGGGAGCATGTCTGCGTCTCGAACTGCACCCTGATCCGTAAAAAGTGTGTTACtttgttgaccagagccctgtatggaccctggtgaaaagtagtgcactatacaggaaatagagTGGCGTTTAAGATCCGATCGAGGAGTTtcagtggaggagggggaggaggaggaggaaaagaagaaGATGTCATACATCCAGCACCATATCATACTGCTGTTCTTTCTTCCTCTTGCCACATTTAGTGATCAGTACCATGTACAACGTCAAGAGCATGACCCAGTAGCTGGCGTACACTATCGCACCAACGATTAAGACTATCTTTTCAGAGTCTGGAAAAGGAAAATCTTTTCTGGTTTCCTGGACGACCGTATAGATAATGCCAAGGAAGAGGATGGTGAACCAGACCGATATGGGAACGAGCCCTACGAAGTTAGTCACGATCGTCTTCCTCCCTGACGTGCCCCAGCCAGCCTTGTTTATGGTGGCGATAGCGAACATCTTGGCCGGTAGCAGACTGGACATGTACAACACTGAGTAGAAGGACATGAAGACCATGACGATGTTGCCCCTCATGCAAGAGGCAAAGGAGGACTTGATGAGGGCGACCGCCTGGACGATCAACAGGAAGAGAAGGATATTCCAGATCCTCCCCTGGTAGAACAGCTGTATCGCCGTGGCAATGAGGAAGAAGGGGAAGAACCCGGTGATGACAGCCTCGTAGGTCATCCAGAGGTGGTGTTTGTGGAACCACATGGCGTTGTAGAGCCACTCTCTGAAGTAAGACTTACTCCACCGGGTCTGCTGGTTCAGCCAGCGCAGGTAGGTGATGGGGGTCTCGGTCAGGCACTTGGACCGGGCCGTGTACTTGGTGGCGTAGCCCAGGCTCAGCACGCGGTTGGTGAGGTGGCGGTCGTCGCCGAAGCTACAGTGGCTGCCCATGAATGTCTGGTTGTACCAATCCTCTATGAACTCGTGGAGCAGGTTGTTCCTGTACATTCCCAGTGGTCCGCTGATACACTGGACGCAGCCGAAGTAGGACTGACACGCTCGCTCGATGTTGAAGGCCATCCAGTAACGGACGCTGCTAAGAAACGAGATCCAGGACTC

Function

NR:

description
PREDICTED: hyaluronan synthase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122673 True 2730 TUCP 0.43 2 4808739 4811575

Neighbor

gene id symbol gene type direction distance location
LOC118937361 NA coding upstream 71455 4735246 ~ 4737284 (+)
LOC110520696 mtbp coding upstream 154006 4602958 ~ 4654733 (+)
LOC118937359 NA coding upstream 172601 4634503 ~ 4636138 (+)
col14a1a col14a1 coding upstream 236358 4327983 ~ 4572381 (+)
deptor deptor coding upstream 506203 4236880 ~ 4302536 (+)
LOC110506140 LOC106606110 coding downstream 336526 5148101 ~ 5176987 (+)
tbc1d31 tbc1d31 coding downstream 384356 5195931 ~ 5227041 (+)
LOC110520809 LOC106598492 coding downstream 416482 5228057 ~ 5235894 (+)
mrpl32 LOC106595598 coding downstream 462581 5274156 ~ 5275584 (+)
LOC118937366 NA coding downstream 472119 5283628 ~ 5285741 (+)
G107942 NA non-coding upstream 23195 4784631 ~ 4785544 (+)
G107932 NA non-coding upstream 44267 4763291 ~ 4764472 (+)
G107917 NA non-coding upstream 74891 4731957 ~ 4733848 (+)
G107912 NA non-coding upstream 86449 4711544 ~ 4722290 (+)
G107958 NA non-coding downstream 8158 4819733 ~ 4820296 (+)
G107965 NA non-coding downstream 25808 4837383 ~ 4837938 (+)
G107967 NA non-coding downstream 27829 4839404 ~ 4840100 (+)
G108031 NA non-coding downstream 30497 4842072 ~ 4842349 (+)
G108042 NA non-coding downstream 38172 4849747 ~ 4849961 (+)
G107922 NA other upstream 63153 4744168 ~ 4745586 (+)
G106814 NA other upstream 670243 4137813 ~ 4138496 (+)
G106775 NA other upstream 781145 4027075 ~ 4027594 (+)
G106575 NA other upstream 1008387 3639434 ~ 3800352 (+)
G106595 NA other upstream 1130889 3676265 ~ 3677850 (+)
G108048 NA other downstream 46336 4857911 ~ 4858274 (+)
G108280 NA other downstream 324781 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 484604 5296179 ~ 5299933 (+)
ptp4a3b LOC106596188 other downstream 694971 5480975 ~ 5542867 (+)
LOC110506279 LOC106595015 other downstream 769718 5575366 ~ 5592253 (+)

Expression


Co-expression Network