Gene
RNA
| Item | Value |
|---|---|
| gene id | G107958 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 4819733 ~ 4820296 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU122677 | True | 374 | lncRNA | 0.43 | 2 | 4819733 | 4820296 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937361 | NA | coding | upstream | 82449 | 4735246 ~ 4737284 (+) |
| LOC110520696 | mtbp | coding | upstream | 165000 | 4602958 ~ 4654733 (+) |
| LOC118937359 | NA | coding | upstream | 183595 | 4634503 ~ 4636138 (+) |
| col14a1a | col14a1 | coding | upstream | 247352 | 4327983 ~ 4572381 (+) |
| deptor | deptor | coding | upstream | 517197 | 4236880 ~ 4302536 (+) |
| LOC110506140 | LOC106606110 | coding | downstream | 327805 | 5148101 ~ 5176987 (+) |
| tbc1d31 | tbc1d31 | coding | downstream | 375635 | 5195931 ~ 5227041 (+) |
| LOC110520809 | LOC106598492 | coding | downstream | 407761 | 5228057 ~ 5235894 (+) |
| mrpl32 | LOC106595598 | coding | downstream | 453860 | 5274156 ~ 5275584 (+) |
| LOC118937366 | NA | coding | downstream | 463398 | 5283628 ~ 5285741 (+) |
| G107942 | NA | non-coding | upstream | 34189 | 4784631 ~ 4785544 (+) |
| G107932 | NA | non-coding | upstream | 55261 | 4763291 ~ 4764472 (+) |
| G107917 | NA | non-coding | upstream | 85885 | 4731957 ~ 4733848 (+) |
| G107912 | NA | non-coding | upstream | 97443 | 4711544 ~ 4722290 (+) |
| G107965 | NA | non-coding | downstream | 17087 | 4837383 ~ 4837938 (+) |
| G107967 | NA | non-coding | downstream | 19108 | 4839404 ~ 4840100 (+) |
| G108031 | NA | non-coding | downstream | 21776 | 4842072 ~ 4842349 (+) |
| G108042 | NA | non-coding | downstream | 29451 | 4849747 ~ 4849961 (+) |
| G108070 | NA | non-coding | downstream | 67572 | 4887868 ~ 4888093 (+) |
| G107955 | LOC106592862 | other | upstream | 8158 | 4808739 ~ 4811575 (+) |
| G107922 | NA | other | upstream | 74147 | 4744168 ~ 4745586 (+) |
| G106814 | NA | other | upstream | 681237 | 4137813 ~ 4138496 (+) |
| G106775 | NA | other | upstream | 792139 | 4027075 ~ 4027594 (+) |
| G106575 | NA | other | upstream | 1019381 | 3639434 ~ 3800352 (+) |
| G108048 | NA | other | downstream | 37615 | 4857911 ~ 4858274 (+) |
| G108280 | NA | other | downstream | 316060 | 5136356 ~ 5136992 (+) |
| G108354 | LOC106573122 | other | downstream | 475883 | 5296179 ~ 5299933 (+) |
| ptp4a3b | LOC106596188 | other | downstream | 686250 | 5480975 ~ 5542867 (+) |
| LOC110506279 | LOC106595015 | other | downstream | 760997 | 5575366 ~ 5592253 (+) |
