G108048


Basic Information

Item Value
gene id G108048
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4857911 ~ 4858274 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122792
ggtccacagacgatgcaatctcaaccacactgcacactgccctaacccatctggacaagaggaatacctatgtgagaatgctgttcattgactacagctcggcattcaacaccatagtaccctccaagcttgtcatcaagctcgagaccctgggtctcgaccccgccctgtgcaactgggtactggacttcctgacgggccgcccccaggtggtgagggtaggcaacaacatctcctccccgctgatcctcaacactggggccccacaagggtgcgttctgagccctctcctgtactccctgttcacccacgactgcgtggccacgcacgcctccaactcaatcatcaagtttgcggacgacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122792 True 364 TUCP 0.53 1 4857911 4858274

Neighbor

gene id symbol gene type direction distance location
LOC118937361 NA coding upstream 120627 4735246 ~ 4737284 (+)
LOC110520696 mtbp coding upstream 203178 4602958 ~ 4654733 (+)
LOC118937359 NA coding upstream 221773 4634503 ~ 4636138 (+)
col14a1a col14a1 coding upstream 285530 4327983 ~ 4572381 (+)
deptor deptor coding upstream 555375 4236880 ~ 4302536 (+)
LOC110506140 LOC106606110 coding downstream 289827 5148101 ~ 5176987 (+)
tbc1d31 tbc1d31 coding downstream 337657 5195931 ~ 5227041 (+)
LOC110520809 LOC106598492 coding downstream 369783 5228057 ~ 5235894 (+)
mrpl32 LOC106595598 coding downstream 415882 5274156 ~ 5275584 (+)
LOC118937366 NA coding downstream 425420 5283628 ~ 5285741 (+)
G108042 NA non-coding upstream 7950 4849747 ~ 4849961 (+)
G108031 NA non-coding upstream 15562 4842072 ~ 4842349 (+)
G107967 NA non-coding upstream 17811 4839404 ~ 4840100 (+)
G107965 NA non-coding upstream 19973 4837383 ~ 4837938 (+)
G107958 NA non-coding upstream 37615 4819733 ~ 4820296 (+)
G108070 NA non-coding downstream 29594 4887868 ~ 4888093 (+)
G108071 NA non-coding downstream 29822 4888096 ~ 4888300 (+)
G108084 NA non-coding downstream 54780 4913054 ~ 4913353 (+)
G108136 NA non-coding downstream 93485 4951759 ~ 4952386 (+)
G108139 NA non-coding downstream 97174 4955448 ~ 4955782 (+)
G107955 LOC106592862 other upstream 46336 4808739 ~ 4811575 (+)
G107922 NA other upstream 112325 4744168 ~ 4745586 (+)
G106814 NA other upstream 719415 4137813 ~ 4138496 (+)
G106775 NA other upstream 830317 4027075 ~ 4027594 (+)
G106575 NA other upstream 1057559 3639434 ~ 3800352 (+)
G108280 NA other downstream 278082 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 437905 5296179 ~ 5299933 (+)
ptp4a3b LOC106596188 other downstream 648272 5480975 ~ 5542867 (+)
LOC110506279 LOC106595015 other downstream 723019 5575366 ~ 5592253 (+)
G108682 NA other downstream 861691 5719965 ~ 5725579 (+)

Expression


Co-expression Network