Gene
RNA
| Item | Value |
|---|---|
| gene id | G108136 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 4951759 ~ 4952386 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU122888 | True | 628 | lncRNA | 0.42 | 1 | 4951759 | 4952386 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937361 | NA | coding | upstream | 214475 | 4735246 ~ 4737284 (+) |
| LOC110520696 | mtbp | coding | upstream | 297026 | 4602958 ~ 4654733 (+) |
| LOC118937359 | NA | coding | upstream | 315621 | 4634503 ~ 4636138 (+) |
| col14a1a | col14a1 | coding | upstream | 379378 | 4327983 ~ 4572381 (+) |
| deptor | deptor | coding | upstream | 649223 | 4236880 ~ 4302536 (+) |
| LOC110506140 | LOC106606110 | coding | downstream | 195715 | 5148101 ~ 5176987 (+) |
| tbc1d31 | tbc1d31 | coding | downstream | 243545 | 5195931 ~ 5227041 (+) |
| LOC110520809 | LOC106598492 | coding | downstream | 275671 | 5228057 ~ 5235894 (+) |
| mrpl32 | LOC106595598 | coding | downstream | 321770 | 5274156 ~ 5275584 (+) |
| LOC118937366 | NA | coding | downstream | 331308 | 5283628 ~ 5285741 (+) |
| G108084 | NA | non-coding | upstream | 38406 | 4913054 ~ 4913353 (+) |
| G108071 | NA | non-coding | upstream | 63459 | 4888096 ~ 4888300 (+) |
| G108070 | NA | non-coding | upstream | 63666 | 4887868 ~ 4888093 (+) |
| G108042 | NA | non-coding | upstream | 101798 | 4849747 ~ 4849961 (+) |
| G108031 | NA | non-coding | upstream | 109410 | 4842072 ~ 4842349 (+) |
| G108139 | NA | non-coding | downstream | 3062 | 4955448 ~ 4955782 (+) |
| G108149 | NA | non-coding | downstream | 11484 | 4963870 ~ 4964105 (+) |
| G108170 | NA | non-coding | downstream | 32381 | 4984767 ~ 4984975 (+) |
| G108189 | NA | non-coding | downstream | 51470 | 5003856 ~ 5004116 (+) |
| G108190 | NA | non-coding | downstream | 52191 | 5004577 ~ 5004821 (+) |
| G108048 | NA | other | upstream | 93485 | 4857911 ~ 4858274 (+) |
| G107955 | LOC106592862 | other | upstream | 140184 | 4808739 ~ 4811575 (+) |
| G107922 | NA | other | upstream | 206173 | 4744168 ~ 4745586 (+) |
| G106814 | NA | other | upstream | 813263 | 4137813 ~ 4138496 (+) |
| G106775 | NA | other | upstream | 924165 | 4027075 ~ 4027594 (+) |
| G108280 | NA | other | downstream | 183970 | 5136356 ~ 5136992 (+) |
| G108354 | LOC106573122 | other | downstream | 343793 | 5296179 ~ 5299933 (+) |
| ptp4a3b | LOC106596188 | other | downstream | 554160 | 5480975 ~ 5542867 (+) |
| LOC110506279 | LOC106595015 | other | downstream | 628907 | 5575366 ~ 5592253 (+) |
| G108682 | NA | other | downstream | 767579 | 5719965 ~ 5725579 (+) |
