G108170


Basic Information

Item Value
gene id G108170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 4984767 ~ 4984975 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU122927
gttgaagtggacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtataaacaAGGGctagggggagagaatgagagaaagagaataagaGAGAAAAAAAGCAAAAATGTGAGCGAGCGAGTGTGAACAcgcgagagagagaccagggtgtAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122927 True 209 lncRNA 0.43 1 4984767 4984975

Neighbor

gene id symbol gene type direction distance location
LOC118937361 NA coding upstream 247483 4735246 ~ 4737284 (+)
LOC110520696 mtbp coding upstream 330034 4602958 ~ 4654733 (+)
LOC118937359 NA coding upstream 348629 4634503 ~ 4636138 (+)
col14a1a col14a1 coding upstream 412386 4327983 ~ 4572381 (+)
deptor deptor coding upstream 682231 4236880 ~ 4302536 (+)
LOC110506140 LOC106606110 coding downstream 163126 5148101 ~ 5176987 (+)
tbc1d31 tbc1d31 coding downstream 210956 5195931 ~ 5227041 (+)
LOC110520809 LOC106598492 coding downstream 243082 5228057 ~ 5235894 (+)
mrpl32 LOC106595598 coding downstream 289181 5274156 ~ 5275584 (+)
LOC118937366 NA coding downstream 298719 5283628 ~ 5285741 (+)
G108149 NA non-coding upstream 20662 4963870 ~ 4964105 (+)
G108139 NA non-coding upstream 28985 4955448 ~ 4955782 (+)
G108136 NA non-coding upstream 32381 4951759 ~ 4952386 (+)
G108084 NA non-coding upstream 71414 4913054 ~ 4913353 (+)
G108071 NA non-coding upstream 96467 4888096 ~ 4888300 (+)
G108189 NA non-coding downstream 18881 5003856 ~ 5004116 (+)
G108190 NA non-coding downstream 19602 5004577 ~ 5004821 (+)
G108192 NA non-coding downstream 20295 5005270 ~ 5005557 (+)
G108193 NA non-coding downstream 22231 5007206 ~ 5007598 (+)
G108198 NA non-coding downstream 25958 5010933 ~ 5011660 (+)
G108048 NA other upstream 126493 4857911 ~ 4858274 (+)
G107955 LOC106592862 other upstream 173192 4808739 ~ 4811575 (+)
G107922 NA other upstream 239181 4744168 ~ 4745586 (+)
G106814 NA other upstream 846271 4137813 ~ 4138496 (+)
G106775 NA other upstream 957173 4027075 ~ 4027594 (+)
G108280 NA other downstream 151381 5136356 ~ 5136992 (+)
G108354 LOC106573122 other downstream 311204 5296179 ~ 5299933 (+)
ptp4a3b LOC106596188 other downstream 521571 5480975 ~ 5542867 (+)
LOC110506279 LOC106595015 other downstream 596318 5575366 ~ 5592253 (+)
G108682 NA other downstream 734990 5719965 ~ 5725579 (+)

Expression


Co-expression Network