Gene
RNA
| Item | Value |
|---|---|
| gene id | G108198 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5010933 ~ 5011660 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU122958 | True | 630 | lncRNA | 0.40 | 2 | 5010933 | 5011660 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937361 | NA | coding | upstream | 273649 | 4735246 ~ 4737284 (+) |
| LOC110520696 | mtbp | coding | upstream | 356200 | 4602958 ~ 4654733 (+) |
| LOC118937359 | NA | coding | upstream | 374795 | 4634503 ~ 4636138 (+) |
| col14a1a | col14a1 | coding | upstream | 438552 | 4327983 ~ 4572381 (+) |
| deptor | deptor | coding | upstream | 708397 | 4236880 ~ 4302536 (+) |
| LOC110506140 | LOC106606110 | coding | downstream | 136441 | 5148101 ~ 5176987 (+) |
| tbc1d31 | tbc1d31 | coding | downstream | 184271 | 5195931 ~ 5227041 (+) |
| LOC110520809 | LOC106598492 | coding | downstream | 216397 | 5228057 ~ 5235894 (+) |
| mrpl32 | LOC106595598 | coding | downstream | 262496 | 5274156 ~ 5275584 (+) |
| LOC118937366 | NA | coding | downstream | 272034 | 5283628 ~ 5285741 (+) |
| G108193 | NA | non-coding | upstream | 3335 | 5007206 ~ 5007598 (+) |
| G108192 | NA | non-coding | upstream | 5376 | 5005270 ~ 5005557 (+) |
| G108190 | NA | non-coding | upstream | 6112 | 5004577 ~ 5004821 (+) |
| G108189 | NA | non-coding | upstream | 6817 | 5003856 ~ 5004116 (+) |
| G108170 | NA | non-coding | upstream | 25958 | 4984767 ~ 4984975 (+) |
| G108214 | NA | non-coding | downstream | 13048 | 5024708 ~ 5024950 (+) |
| G108217 | NA | non-coding | downstream | 15520 | 5027180 ~ 5027412 (+) |
| G108221 | NA | non-coding | downstream | 24364 | 5036024 ~ 5036266 (+) |
| G108233 | NA | non-coding | downstream | 41390 | 5053050 ~ 5054017 (+) |
| G108241 | NA | non-coding | downstream | 67714 | 5079374 ~ 5081634 (+) |
| G108048 | NA | other | upstream | 152659 | 4857911 ~ 4858274 (+) |
| G107955 | LOC106592862 | other | upstream | 199358 | 4808739 ~ 4811575 (+) |
| G107922 | NA | other | upstream | 265347 | 4744168 ~ 4745586 (+) |
| G106814 | NA | other | upstream | 872437 | 4137813 ~ 4138496 (+) |
| G106775 | NA | other | upstream | 983339 | 4027075 ~ 4027594 (+) |
| G108280 | NA | other | downstream | 124696 | 5136356 ~ 5136992 (+) |
| G108354 | LOC106573122 | other | downstream | 284519 | 5296179 ~ 5299933 (+) |
| ptp4a3b | LOC106596188 | other | downstream | 494886 | 5480975 ~ 5542867 (+) |
| LOC110506279 | LOC106595015 | other | downstream | 569633 | 5575366 ~ 5592253 (+) |
| G108682 | NA | other | downstream | 708305 | 5719965 ~ 5725579 (+) |
