Gene
RNA
| Item | Value |
|---|---|
| gene id | G108280 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5136356 ~ 5136992 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: proteoglycan 4-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123045 | True | 311 | TUCP | 0.51 | 2 | 5136356 | 5136992 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937361 | NA | coding | upstream | 399072 | 4735246 ~ 4737284 (+) |
| LOC110520696 | mtbp | coding | upstream | 481623 | 4602958 ~ 4654733 (+) |
| LOC118937359 | NA | coding | upstream | 500218 | 4634503 ~ 4636138 (+) |
| col14a1a | col14a1 | coding | upstream | 563975 | 4327983 ~ 4572381 (+) |
| deptor | deptor | coding | upstream | 833820 | 4236880 ~ 4302536 (+) |
| LOC110506140 | LOC106606110 | coding | downstream | 11109 | 5148101 ~ 5176987 (+) |
| tbc1d31 | tbc1d31 | coding | downstream | 58939 | 5195931 ~ 5227041 (+) |
| LOC110520809 | LOC106598492 | coding | downstream | 91065 | 5228057 ~ 5235894 (+) |
| mrpl32 | LOC106595598 | coding | downstream | 137164 | 5274156 ~ 5275584 (+) |
| LOC118937366 | NA | coding | downstream | 146702 | 5283628 ~ 5285741 (+) |
| G108262 | NA | non-coding | upstream | 37470 | 5097542 ~ 5098886 (+) |
| G108261 | NA | non-coding | upstream | 39261 | 5096781 ~ 5097095 (+) |
| G108241 | NA | non-coding | upstream | 54722 | 5079374 ~ 5081634 (+) |
| G108233 | NA | non-coding | upstream | 82339 | 5053050 ~ 5054017 (+) |
| G108221 | NA | non-coding | upstream | 100090 | 5036024 ~ 5036266 (+) |
| G108281 | NA | non-coding | downstream | 672 | 5137664 ~ 5138358 (+) |
| G108300 | NA | non-coding | downstream | 30403 | 5167395 ~ 5171655 (+) |
| G108252 | NA | non-coding | downstream | 54585 | 5191577 ~ 5192957 (+) |
| G108323 | NA | non-coding | downstream | 69573 | 5206565 ~ 5207066 (+) |
| G108326 | NA | non-coding | downstream | 72788 | 5209780 ~ 5210360 (+) |
| G108048 | NA | other | upstream | 278082 | 4857911 ~ 4858274 (+) |
| G107955 | LOC106592862 | other | upstream | 324781 | 4808739 ~ 4811575 (+) |
| G107922 | NA | other | upstream | 390770 | 4744168 ~ 4745586 (+) |
| G106814 | NA | other | upstream | 997860 | 4137813 ~ 4138496 (+) |
| G106775 | NA | other | upstream | 1108762 | 4027075 ~ 4027594 (+) |
| G108354 | LOC106573122 | other | downstream | 159187 | 5296179 ~ 5299933 (+) |
| ptp4a3b | LOC106596188 | other | downstream | 369554 | 5480975 ~ 5542867 (+) |
| LOC110506279 | LOC106595015 | other | downstream | 444301 | 5575366 ~ 5592253 (+) |
| G108682 | NA | other | downstream | 582973 | 5719965 ~ 5725579 (+) |
| G108702 | NA | other | downstream | 643222 | 5780214 ~ 5782921 (+) |
