Gene
RNA
| Item | Value |
|---|---|
| gene id | G108429 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5138250 ~ 5138627 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123242 | True | 346 | lncRNA | 0.34 | 2 | 5138250 | 5138627 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936926 | LOC106594463 | coding | downstream | 70138 | 5066972 ~ 5068112 (-) |
| has2 | LOC106592862 | coding | downstream | 296848 | 4808713 ~ 4841402 (-) |
| sntb1 | LOC106595750 | coding | downstream | 398152 | 4662333 ~ 4740098 (-) |
| mrpl13 | LOC106606163 | coding | downstream | 535453 | 4575437 ~ 4602797 (-) |
| dscc1 | LOC106595460 | coding | downstream | 901458 | 4227282 ~ 4236792 (-) |
| LOC118944032 | NA | coding | upstream | 4302 | 5142929 ~ 5164600 (-) |
| derl1 | derl1 | coding | upstream | 41961 | 5180588 ~ 5195460 (-) |
| zgc:101716 | LOC106594901 | coding | upstream | 97298 | 5235925 ~ 5238087 (-) |
| LOC110520807 | LOC106594904 | coding | upstream | 103338 | 5241965 ~ 5248382 (-) |
| LOC110520837 | LOC100380869 | coding | upstream | 109852 | 5248479 ~ 5262214 (-) |
| G108425 | NA | non-coding | downstream | 9104 | 5125194 ~ 5129146 (-) |
| G108412 | NA | non-coding | downstream | 39986 | 5097855 ~ 5098264 (-) |
| G108404 | NA | non-coding | downstream | 49861 | 5088100 ~ 5088389 (-) |
| G108384 | NA | non-coding | downstream | 85422 | 5052381 ~ 5052828 (-) |
| G108383 | NA | non-coding | downstream | 87776 | 5050193 ~ 5050474 (-) |
| G108436 | NA | non-coding | upstream | 13152 | 5151779 ~ 5152919 (-) |
| G108468 | NA | non-coding | upstream | 67894 | 5206521 ~ 5206966 (-) |
| G108473 | NA | non-coding | upstream | 99566 | 5238193 ~ 5240343 (-) |
| G108511 | NA | non-coding | upstream | 199386 | 5338013 ~ 5349664 (-) |
| G108517 | NA | non-coding | upstream | 214873 | 5353500 ~ 5353758 (-) |
| G108033 | NA | other | downstream | 294159 | 4843061 ~ 4844091 (-) |
| G107849 | NA | other | downstream | 586285 | 4550313 ~ 4551965 (-) |
| G107843 | NA | other | downstream | 598627 | 4539235 ~ 4539623 (-) |
| G107755 | NA | other | downstream | 761827 | 4375922 ~ 4376423 (-) |
| G107576 | NA | other | downstream | 838020 | 4297445 ~ 4302456 (-) |
| G108477 | NA | other | upstream | 101991 | 5240618 ~ 5241664 (-) |
| LOC110520858 | LOC106606136 | other | upstream | 283870 | 5422229 ~ 5430785 (-) |
| G109302 | NA | other | upstream | 699050 | 5837677 ~ 5840273 (-) |
| atxn1b | LOC106597954 | other | upstream | 722942 | 5860711 ~ 5875088 (-) |
| G109273 | LOC106606171 | other | upstream | 744355 | 5882982 ~ 5886155 (-) |
