G108326


Basic Information

Item Value
gene id G108326
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5209780 ~ 5210360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123110
aataaagttgACATCATTAGAATAAAGATATTCTCCTCTTTTCTACTGTAGGTAGGTCATCCACAATGTGTTCACCCCCAGTTGAATACCCCTTGACCTAGAGGCTTGGAACTTTGTATGTAGGTGACTTTTCTCATGCTGAACAAATTTGCCTCAAATTTGCCCCATCAAAGCACGGTCACACTGAGTGGATATTCACACTGTTCTCAGGGCAGGTCTGCCAGGTTTGACTAGAAGAAGTGACTTTTCGCAGCAGgttaggagaattaacatggtAGGTTAGGAACATTTGGTTAAGGGTTAGCTAAAACACTATACATTTTCCCCGATAAGACTCTTAACATATTTAGCTACAACTAAGCTTGCCCTGATAACAGTCTTGGTTTCCACTAATGTGATTCTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123110 True 405 lncRNA 0.41 2 5209780 5210360

Neighbor

gene id symbol gene type direction distance location
LOC110506140 LOC106606110 coding upstream 32793 5148101 ~ 5176987 (+)
LOC118937361 NA coding upstream 472496 4735246 ~ 4737284 (+)
LOC110520696 mtbp coding upstream 555047 4602958 ~ 4654733 (+)
LOC118937359 NA coding upstream 573642 4634503 ~ 4636138 (+)
col14a1a col14a1 coding upstream 637399 4327983 ~ 4572381 (+)
LOC110520809 LOC106598492 coding downstream 17697 5228057 ~ 5235894 (+)
mrpl32 LOC106595598 coding downstream 63796 5274156 ~ 5275584 (+)
LOC118937366 NA coding downstream 73334 5283628 ~ 5285741 (+)
ccdc127a cc127 coding downstream 95916 5306276 ~ 5310035 (+)
phf20l1 LOC100196869 coding downstream 111194 5321554 ~ 5349672 (+)
G108323 NA non-coding upstream 2714 5206565 ~ 5207066 (+)
G108252 NA non-coding upstream 16823 5191577 ~ 5192957 (+)
G108300 NA non-coding upstream 38125 5167395 ~ 5171655 (+)
G108281 NA non-coding upstream 71422 5137664 ~ 5138358 (+)
G108262 NA non-coding upstream 110894 5097542 ~ 5098886 (+)
G108330 NA non-coding downstream 11508 5221868 ~ 5222697 (+)
G108331 NA non-coding downstream 13247 5223607 ~ 5224256 (+)
G108332 NA non-coding downstream 14846 5225206 ~ 5226130 (+)
G108334 NA non-coding downstream 27867 5238227 ~ 5240350 (+)
G108336 NA non-coding downstream 30251 5240611 ~ 5241683 (+)
G108280 NA other upstream 72788 5136356 ~ 5136992 (+)
G108048 NA other upstream 351506 4857911 ~ 4858274 (+)
G107955 LOC106592862 other upstream 398205 4808739 ~ 4811575 (+)
G107922 NA other upstream 464194 4744168 ~ 4745586 (+)
G106814 NA other upstream 1071284 4137813 ~ 4138496 (+)
G108354 LOC106573122 other downstream 85819 5296179 ~ 5299933 (+)
ptp4a3b LOC106596188 other downstream 296186 5480975 ~ 5542867 (+)
LOC110506279 LOC106595015 other downstream 370933 5575366 ~ 5592253 (+)
G108682 NA other downstream 509605 5719965 ~ 5725579 (+)
G108702 NA other downstream 569854 5780214 ~ 5782921 (+)

Expression


Co-expression Network