XLOC_020838 (FO904898.6)


Basic Information

Item Value
gene id XLOC_020838
gene name FO904898.6
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 6809366 ~ 6818528 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041046
ATGAGGATGAATATCTCTGTACTGTTGGTGCTTCTGCCAGTTGGGATTGTTGGAGCTGATTCATATGGAGTTTCAGTGATGGAGGGAGATCCAGTCACTCTACCCACCAATGTTACAAAAACCCAACAGGAAgatgttaaatattatttcaacAACACTCTTATCGCTCAACTCACTGGAGATCTCAGTTTTGCTTGCACTGATGTGCAGTGTAATAAAGTGAATGAGAGATTCAGAGGCCGACTGAAGCTAGACTATGAAACTGGAACTCTGACCATCATGAACACCACAAGCACAGACTCTGGAGATTATCATCAAGAGATCATCGGCAGCGGCACCATCCATGAAAATATCTTCAATGTTTCTGTCCATAGTGAGTCACTTTTTAATCACATCCCAGTGTATTGCTGATATCTGATTTCTTTTTGCCTGCTTTCTCATTATGCAGATCTTTTATGAACTTTTCCTgtgtgtagattttttttttctctagaatGATTTCAAATTGATTAGCCTATTTGGTGTCTTTAACCTCATGATTGATGAAAACAAACAACATTAAAGTGCAAGCTGGGTACCAAATATACTAAATAAAGTTACATAGACAATGTAACTTTTTAGACAGTTGTTGTCACAAGACCATGCATGGAGCTTTCTTTCCAAAATGACCGTAAATCATCTGTTGGTTTGTGTTTCAGATGTTTCTGCTACTAAAAGAGATGTAGTCAAGAAAATGTCAGAGAAGGAGGGAGAATCTGTCACTTCAGATTCtggtaataaattaataatgcaaTCAATAATTTTATTACTTTGATGGCTTGTTGTTATCTTGTTATTGATACATTCTATCTTTATCAGTTTCAGTTCTGTCTTTAGGTGCTGTAGCCGGAATGTCTTGTTGTTATTGCTGCTGTTGCTGGTGGGATTTACTATCACAGGTGCCAAACAACAGTTTTAACATGATGAAAATATAAAG
>TCONS_00041047
GAAGCAGAAGTAAGAAAGTAGGAACAGAAAAGCTTAAAGAAGAAGGAAAAGTCACTCTTGATGAGGATGAATATCTCTGTACTGTTGGTGCTTCTGCCAGTTGGGATTGTTGGAGCTGATTCATATGGAGTTTCAGTGATGGAGGGAGATCCAGTCACTCTACCCACCAATGTTACAAAAACCCAACAGGAAgatgttaaatattatttcaacAACACTCTTATCGCTCAACTCACTGGAGATCTCAGTTTTGCTTGCACTGATGTGCAGTGTAATAAAGTGAATGAGAGATTCAGAGGCCGACTGAAGCTAGACTATGAAACTGGAACTCTGACCATCATGAACACCACAAGCACAGACTCTGGAGATTATCATCAAGAGATCATCGGCAGCGGCACCATCCATGAAAATATCTTCAATGTTTCTGTCCATAATGTTTCTGCTACTAAAAGAGATGTAGTCAAGAAAATGTCAGAGAAGGAGGGAGAATCTGTCACTTCAGATTCtggtaataaattaataatgcaaTCAATAATTTTATTACTTTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117742

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041046 False 976 lncRNA 0.37 2 6809366 6813803
TCONS_00041047 True 549 lncRNA 0.39 4 6809528 6818528

Neighbor

gene id symbol gene type direction distance location
XLOC_020837 si:ch1073-188e1.1 coding downstream 7490 6788761 ~ 6801876 (-)
XLOC_020836 CT583625.5 coding downstream 31390 6764980 ~ 6777976 (-)
XLOC_020835 NA coding downstream 56340 6727540 ~ 6753026 (-)
XLOC_020834 NA coding downstream 97850 6696517 ~ 6711516 (-)
XLOC_020833 CR352226.3 coding downstream 146460 6661712 ~ 6662906 (-)
XLOC_020839 FO904898.1 coding upstream 10938 6829466 ~ 6854584 (-)
XLOC_020840 FO904898.4 coding upstream 62917 6881445 ~ 6884981 (-)
XLOC_020841 CABZ01065328.1 coding upstream 103478 6922006 ~ 6923347 (-)
XLOC_020842 zgc:171500 coding upstream 113771 6932299 ~ 6941098 (-)
XLOC_020843 si:ch73-213k20.5 coding upstream 133579 6952107 ~ 6960943 (-)
XLOC_020831 CR352226.2 non-coding downstream 207779 6587550 ~ 6601587 (-)
XLOC_020830 NA non-coding downstream 243405 6563646 ~ 6565961 (-)
XLOC_020851 NA non-coding upstream 604356 7422884 ~ 7423468 (-)
XLOC_020852 BX511034.4 non-coding upstream 620727 7439255 ~ 7442462 (-)
XLOC_020857 NA non-coding upstream 793476 7612004 ~ 7622403 (-)
XLOC_020858 BX511034.3 non-coding upstream 796144 7614672 ~ 7617991 (-)
XLOC_020860 NA non-coding upstream 830491 7649019 ~ 7651852 (-)

Expression


Co-expression Network