G108354 (LOC106573122)


Basic Information

Item Value
gene id G108354
gene name LOC106573122
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5296179 ~ 5299933 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123151
ATGACACATTTGAAATAATACACAGAACATAAGAACAAAGCAAATATAAATTAATTCTTGGTAACATACATAGTATTTCATTTATTTCCCCCTTCCTAATTGTCTTAATGTCCACTATATTCCACCAGTAAATAGCACAAAGACAACTAGGGTTGAGAATATTTTTAAATATTGCCATAAAGTGCATAACCTGTAGCAAGCAGAGTGAAATCAAACATCCCATCAAATATTGCTGGTTACACGCCAGGTCTACACATGAATTTATCCTGACAGGATAATCATTAAAGACGATGTGTTAATGACTCTGAAGGGACATCTACAGGAAATAGGACGTCTCAGCACTCTGAACTACAACGATTACACAACATTAAAATTCAGTTTTCCATTCAGAGTCCTAATATTATGGTATCAGTGGATAATAAAGGCCACAGAGAATGGGAGTATTTAGGTAACTACATACCTATAGGGAAACTACTCTACGACTTCATATGACAACAGACAATTAGaaaacagttctatatttacaCACTTCAATCACAATACCTTAACAATTCCTTTGCTTGCAGTGTCGACTACAATATGTGGGTTGAAAGTCAAACTGCATGTGAGACAGCAATAATTCCCTATCTACAGTGCTCCCTCACACAGAGTGAAGGCCACACAGTGAAATGCATCCTAGGTGGGTGTTGCTGGAAGCGTACAGACTGACAATAATAAATAAGTGTTCCTGTTGAGATGGTCTCAATAGGAGCGGATGGCTGGAGGGACGGCTGAACATTCCCCCTGGTCCAGAGAGGTGTCAATCACTGGTCGGTACTCCAGAGTTACCTCGCCAGTCTTGGGATCCACAGTGGACATGGTGTGTTTTCTCCAATGCTGTTCGAAAGGCTTCCTCTCCTGTCCTGCCAGAGGCCTGGCGTAGTCCAGCTCATCCATACGGTCCTTGTAGTCCTCCCGGGCGTGTGCTCCCCTGGTCTCCTTGCGGGCCTCGGCAGAGTGGATAGTCTGGACCGCGTTCAGCATCAGGTTCTGCAGCTCCAGAGACTCGACCAGGTCAGTGTTCCACACCATACCACGGTCGAATGTCTTGATGTCCTCCATGGTCTGGTAGATGGCGTCCATCTTGTCACATCCCTCCTTCAGAACGTCGCCGGTACGGAACACTGCTGCATGGGTCTGCATCGTTCTCTGCATGTTGAGTCTGATCTCAGAGGTTCTGGTGTTCCCGTCAGCAAACCTGATCTTGTCCAGGTTGGCCACAGACTCCTCTCCAGCACTGGGCTTCAGTGGGG

Function

NR:

description
succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123151 True 1292 TUCP 0.45 5 5296179 5299933

Neighbor

gene id symbol gene type direction distance location
LOC118937366 NA coding upstream 10438 5283628 ~ 5285741 (+)
mrpl32 LOC106595598 coding upstream 20595 5274156 ~ 5275584 (+)
LOC110520809 LOC106598492 coding upstream 60285 5228057 ~ 5235894 (+)
tbc1d31 tbc1d31 coding upstream 69138 5195931 ~ 5227041 (+)
LOC110506140 LOC106606110 coding upstream 119192 5148101 ~ 5176987 (+)
ccdc127a cc127 coding downstream 6343 5306276 ~ 5310035 (+)
phf20l1 LOC100196869 coding downstream 21621 5321554 ~ 5349672 (+)
tg LOC106573164 coding downstream 48319 5348252 ~ 5447200 (+)
ccn4b wisp1 coding downstream 151566 5451499 ~ 5457130 (+)
ptp4a3b LOC106596188 coding downstream 181042 5480975 ~ 5542867 (+)
G108333 LOC100380869 non-coding upstream 42147 5249713 ~ 5254032 (+)
G108336 NA non-coding upstream 54496 5240611 ~ 5241683 (+)
G108334 NA non-coding upstream 55829 5238227 ~ 5240350 (+)
G108332 NA non-coding upstream 70049 5225206 ~ 5226130 (+)
G108361 NA non-coding downstream 33820 5333753 ~ 5334485 (+)
G108529 NA non-coding downstream 65898 5365831 ~ 5366530 (+)
G108547 NA non-coding downstream 80145 5380078 ~ 5380438 (+)
G108549 NA non-coding downstream 91489 5391422 ~ 5391666 (+)
G108280 NA other upstream 159187 5136356 ~ 5136992 (+)
G108048 NA other upstream 437905 4857911 ~ 4858274 (+)
G107955 LOC106592862 other upstream 484604 4808739 ~ 4811575 (+)
G107922 NA other upstream 550593 4744168 ~ 4745586 (+)
G106814 NA other upstream 1157683 4137813 ~ 4138496 (+)
LOC110506279 LOC106595015 other downstream 281360 5575366 ~ 5592253 (+)
G108682 NA other downstream 420032 5719965 ~ 5725579 (+)
G108702 NA other downstream 480281 5780214 ~ 5782921 (+)
G108733 NA other downstream 600578 5900511 ~ 5900950 (+)

Expression


Co-expression Network