G108361


Basic Information

Item Value
gene id G108361
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5333753 ~ 5334485 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123162
gttttatactgtctcctctgtcccctcagggccatatgttttatactgtctcctctgtcccctcagggccatatgttttatatgttttatactgtctcCTCTGGgccatgttttatactgtctcctctgtcccctcagggCCATATGTtttatatgttttatactgtctcctctgtcccctcagggccatatgttttatactgtctcctctgtcccctcagggCCATAGGTTTTATAcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123162 True 239 lncRNA 0.40 3 5333753 5334485

Neighbor

gene id symbol gene type direction distance location
ccdc127a cc127 coding upstream 23718 5306276 ~ 5310035 (+)
LOC118937366 NA coding upstream 48012 5283628 ~ 5285741 (+)
mrpl32 LOC106595598 coding upstream 58169 5274156 ~ 5275584 (+)
LOC110520809 LOC106598492 coding upstream 97859 5228057 ~ 5235894 (+)
tbc1d31 tbc1d31 coding upstream 106712 5195931 ~ 5227041 (+)
tg LOC106573164 coding downstream 13767 5348252 ~ 5447200 (+)
ccn4b wisp1 coding downstream 117014 5451499 ~ 5457130 (+)
ptp4a3b LOC106596188 coding downstream 146490 5480975 ~ 5542867 (+)
dync1i1 LOC105016552 coding downstream 208509 5542994 ~ 5572618 (+)
LOC110506279 LOC106595015 coding downstream 240881 5575366 ~ 5592253 (+)
G108333 LOC100380869 non-coding upstream 79721 5249713 ~ 5254032 (+)
G108336 NA non-coding upstream 92070 5240611 ~ 5241683 (+)
G108334 NA non-coding upstream 93403 5238227 ~ 5240350 (+)
G108332 NA non-coding upstream 107623 5225206 ~ 5226130 (+)
G108529 NA non-coding downstream 31346 5365831 ~ 5366530 (+)
G108547 NA non-coding downstream 45593 5380078 ~ 5380438 (+)
G108549 NA non-coding downstream 56937 5391422 ~ 5391666 (+)
G108551 NA non-coding downstream 63852 5398337 ~ 5398594 (+)
G108354 LOC106573122 other upstream 33820 5296179 ~ 5299933 (+)
G108280 NA other upstream 196761 5136356 ~ 5136992 (+)
G108048 NA other upstream 475479 4857911 ~ 4858274 (+)
G107955 LOC106592862 other upstream 522178 4808739 ~ 4811575 (+)
G107922 NA other upstream 588167 4744168 ~ 4745586 (+)
G108682 NA other downstream 385480 5719965 ~ 5725579 (+)
G108702 NA other downstream 445729 5780214 ~ 5782921 (+)
G108733 NA other downstream 566026 5900511 ~ 5900950 (+)

Expression


Co-expression Network