G108511


Basic Information

Item Value
gene id G108511
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5338013 ~ 5349664 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123341
CCAGAATATCTTTTTTTTAATGGCATTGTACATGTAGTAAATCACAAAGAACAGGTCTTAAATAAACTCTTAATGTACAGCTGGTATATGTCAATAAAAATCTACTTTGTTTTCTCCCCTACCGACTGGTTCTAAAACACTTTTTTATACAGGTTAATAGAAACGCTAAATAAACATAGTCATTTTTCTTCAAGTATATTTTATCCTCTTATGTATTTCTACAGATGTCTCCTCATCTTTACAGTTATAAAAACTGTACATAAAATGACCCAAAAAAACAGCAATCAACacattgctttttttttttttttaaatacgcaTTTCACATCCAGCTGGCAATTTAGCTTCCTGTGGTACAAGTCAAACGTGTCCCCTTAGCCCGAAGACATTGTGGTGTTATGTGACGTAGCAGCCATACCGGGGCCGTACTGAAAGCATCAAAAACCCCACAGACAGAGGCTAcgtccccaaacggcaccctattccctatatagtgcactactttagattgTTTGTTTTCCCCTCTGTCGTATTTCATGTGTTTTTCTTCTCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123341 True 555 lncRNA 0.40 2 5338013 5349664

Neighbor

gene id symbol gene type direction distance location
LOC110507177 NA coding downstream 15365 5309738 ~ 5322648 (-)
LOC110520756 LOC106573122 coding downstream 31948 5296155 ~ 5306065 (-)
LOC110520755 LOC106595600 coding downstream 42115 5275623 ~ 5295898 (-)
LOC110507251 LOC106595421 coding downstream 63816 5268132 ~ 5274197 (-)
LOC110520837 LOC100380869 coding downstream 75799 5248479 ~ 5262214 (-)
LOC110520858 LOC106606136 coding upstream 72565 5422229 ~ 5430785 (-)
ndrg1b LOC106606139 coding upstream 108189 5457853 ~ 5477974 (-)
rbfa LOC106573367 coding upstream 242590 5592254 ~ 5594852 (-)
adnp2a LOC106573358 coding upstream 245615 5595279 ~ 5600029 (-)
pard6ga LOC106573343 coding upstream 250958 5600622 ~ 5604727 (-)
G108473 NA non-coding downstream 97670 5238193 ~ 5240343 (-)
G108468 NA non-coding downstream 131047 5206521 ~ 5206966 (-)
G108436 NA non-coding downstream 185094 5151779 ~ 5152919 (-)
G108429 NA non-coding downstream 199386 5138250 ~ 5138627 (-)
G108425 NA non-coding downstream 208867 5125194 ~ 5129146 (-)
G108517 NA non-coding upstream 3836 5353500 ~ 5353758 (-)
G108522 NA non-coding upstream 8385 5358049 ~ 5359185 (-)
G108523 NA non-coding upstream 10033 5359697 ~ 5360054 (-)
G108528 NA non-coding upstream 15529 5365193 ~ 5365409 (-)
G108534 NA non-coding upstream 17589 5367253 ~ 5368609 (-)
G108477 NA other downstream 96349 5240618 ~ 5241664 (-)
G108033 NA other downstream 493922 4843061 ~ 4844091 (-)
G107849 NA other downstream 786048 4550313 ~ 4551965 (-)
G107843 NA other downstream 798390 4539235 ~ 4539623 (-)
G107755 NA other downstream 961590 4375922 ~ 4376423 (-)
G109302 NA other upstream 488013 5837677 ~ 5840273 (-)
atxn1b LOC106597954 other upstream 511905 5860711 ~ 5875088 (-)
G109273 LOC106606171 other upstream 533318 5882982 ~ 5886155 (-)
G109430 NA other upstream 1024246 6373910 ~ 6374361 (-)

Expression


Co-expression Network