Item | Value |
---|---|
gene id | G108551 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 5398337 ~ 5398594 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU123404 | True | 258 | lncRNA | 0.48 | 1 | 5398337 | 5398594 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
phf20l1 | LOC100196869 | coding | upstream | 48665 | 5321554 ~ 5349672 (+) |
ccdc127a | cc127 | coding | upstream | 88302 | 5306276 ~ 5310035 (+) |
LOC118937366 | NA | coding | upstream | 112596 | 5283628 ~ 5285741 (+) |
mrpl32 | LOC106595598 | coding | upstream | 122753 | 5274156 ~ 5275584 (+) |
LOC110520809 | LOC106598492 | coding | upstream | 162443 | 5228057 ~ 5235894 (+) |
ccn4b | wisp1 | coding | downstream | 52905 | 5451499 ~ 5457130 (+) |
ptp4a3b | LOC106596188 | coding | downstream | 82381 | 5480975 ~ 5542867 (+) |
dync1i1 | LOC105016552 | coding | downstream | 144400 | 5542994 ~ 5572618 (+) |
LOC110506279 | LOC106595015 | coding | downstream | 176772 | 5575366 ~ 5592253 (+) |
jarid2a | LOC106573577 | coding | downstream | 217402 | 5615996 ~ 5753847 (+) |
G108549 | NA | non-coding | upstream | 6671 | 5391422 ~ 5391666 (+) |
G108547 | NA | non-coding | upstream | 17899 | 5380078 ~ 5380438 (+) |
G108529 | NA | non-coding | upstream | 31807 | 5365831 ~ 5366530 (+) |
G108361 | NA | non-coding | upstream | 63852 | 5333753 ~ 5334485 (+) |
G108554 | NA | non-coding | downstream | 2962 | 5401556 ~ 5401846 (+) |
G108543 | NA | non-coding | downstream | 19804 | 5418398 ~ 5419781 (+) |
G108567 | NA | non-coding | downstream | 60912 | 5459506 ~ 5460437 (+) |
G108598 | NA | non-coding | downstream | 93397 | 5491991 ~ 5492744 (+) |
G108608 | NA | non-coding | downstream | 109844 | 5508438 ~ 5509164 (+) |
G108354 | LOC106573122 | other | upstream | 98404 | 5296179 ~ 5299933 (+) |
G108280 | NA | other | upstream | 261345 | 5136356 ~ 5136992 (+) |
G108048 | NA | other | upstream | 540063 | 4857911 ~ 4858274 (+) |
G107955 | LOC106592862 | other | upstream | 586762 | 4808739 ~ 4811575 (+) |
G107922 | NA | other | upstream | 652751 | 4744168 ~ 4745586 (+) |
G108682 | NA | other | downstream | 321371 | 5719965 ~ 5725579 (+) |
G108702 | NA | other | downstream | 381620 | 5780214 ~ 5782921 (+) |
G108733 | NA | other | downstream | 501917 | 5900511 ~ 5900950 (+) |