Gene
RNA
| Item | Value |
|---|---|
| gene id | G108567 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5459506 ~ 5460437 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123424 | False | 401 | lncRNA | 0.52 | 3 | 5459506 | 5460437 |
| TU123423 | True | 371 | lncRNA | 0.52 | 2 | 5459800 | 5460437 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccn4b | wisp1 | coding | upstream | 2376 | 5451499 ~ 5457130 (+) |
| tg | LOC106573164 | coding | upstream | 12306 | 5348252 ~ 5447200 (+) |
| phf20l1 | LOC100196869 | coding | upstream | 109834 | 5321554 ~ 5349672 (+) |
| ccdc127a | cc127 | coding | upstream | 149471 | 5306276 ~ 5310035 (+) |
| LOC118937366 | NA | coding | upstream | 173765 | 5283628 ~ 5285741 (+) |
| ptp4a3b | LOC106596188 | coding | downstream | 20538 | 5480975 ~ 5542867 (+) |
| dync1i1 | LOC105016552 | coding | downstream | 82557 | 5542994 ~ 5572618 (+) |
| LOC110506279 | LOC106595015 | coding | downstream | 114929 | 5575366 ~ 5592253 (+) |
| jarid2a | LOC106573577 | coding | downstream | 155559 | 5615996 ~ 5753847 (+) |
| mylipb | LOC106596795 | coding | downstream | 351810 | 5812247 ~ 5839646 (+) |
| G108543 | NA | non-coding | upstream | 39725 | 5418398 ~ 5419781 (+) |
| G108554 | NA | non-coding | upstream | 57660 | 5401556 ~ 5401846 (+) |
| G108598 | NA | non-coding | downstream | 31554 | 5491991 ~ 5492744 (+) |
| G108608 | NA | non-coding | downstream | 48001 | 5508438 ~ 5509164 (+) |
| G108613 | NA | non-coding | downstream | 66267 | 5526704 ~ 5529066 (+) |
| G108615 | NA | non-coding | downstream | 69525 | 5529962 ~ 5532458 (+) |
| G108616 | NA | non-coding | downstream | 72550 | 5532987 ~ 5534119 (+) |
| G108354 | LOC106573122 | other | upstream | 159573 | 5296179 ~ 5299933 (+) |
| G108280 | NA | other | upstream | 322514 | 5136356 ~ 5136992 (+) |
| G108048 | NA | other | upstream | 601232 | 4857911 ~ 4858274 (+) |
| G107955 | LOC106592862 | other | upstream | 647931 | 4808739 ~ 4811575 (+) |
| G107922 | NA | other | upstream | 713920 | 4744168 ~ 4745586 (+) |
| G108682 | NA | other | downstream | 259528 | 5719965 ~ 5725579 (+) |
| G108702 | NA | other | downstream | 319777 | 5780214 ~ 5782921 (+) |
| G108733 | NA | other | downstream | 440074 | 5900511 ~ 5900950 (+) |
