G108584


Basic Information

Item Value
gene id G108584
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5604983 ~ 5606316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123446
TATTTTTGCAGTTAGAAATACAGCGTGCATAATGCTCTAAACCTTTATAATCAGTGGTTATAATTAGTTAAATCAACAGTCAATATGAAGTGATATAAATTACAGTACATTTCCATGTCTGAGAAGGCATATTCACCATTCAGAAGCAATATATTCAATTTCTATCCAACATTCTATTATCTATAGTGTCATAACTTCTAGAGAATTTTCCAGGGCGGAGCTATGATTTGGTGCTTATTAATGTGGATGGCGAAGACTTCTCTGATCAGTGACACTGCTGCATTGTGGTGGCTAAGTCACCAATACTGATTATCtcattttcctcctctcctttccttcatcccCGTCCTCCTTCCTTCCACATTCTGCTAGATCAGTGATGGTGGAAGTTAGGACCCTCTAAGGCAGGTCTTCTACAACAATGGTTCCCAAACTGAGAGGTcggaattcagtccggctttaaacttacttttgaaagttgtaatagtagaatgcacaagctGCAATTGTGAAATTGGGTggtgcatcatcagttcctcttgtcatgtgtGATTGCAGACCTTAGAGAGCTATGTATAAATAACtggtcagaaatgtccagatcaactagcccatgtcagctaacgttttttttattattattttttatcccaTAAATATTGTGGTCATTTTTTTATCACACAAATATCACATgtatacacattagacatggcaaaatgtacgGAAATGCAAGAATAtttttgctttaaaactgcaacattttattGCAccccatgacagaatgtgttgaattgcaggaaataagctttaaacctgcaaaattctctccaccaaccagaggggtgtgaacagtttgtgtcatgaacattgcttgtgcccatagaaatagacatggcgcgggatgttccccaatgctggaaggggggcacCCCGAGGACACCGGAGGGCCGCATTCAAAGTGTTGTATTTCCTTGCCGTcaaaatgtgagaaaaaaaataGTCCTTTATCCATCATTTTAGAAATTTGCTCCCTGACTGTGTAGCTCTAATTTCGGGGATTATTAGCGAGCTGGACACGGtcaagatactgtatgaatgtttCCTAAATATTTGATGCTACTCGTCTTCGGGGccgtatgtttgacacccctgctctaaggCATGGCAGCTAGTTATAACTGGCATGGAGGGTACAGGGTGATTCCTGAGGAATAGGGAGAAGTTGCCTCTTCTCTGACCTACACCTTGACCTCATCAGGAGGATGGTTGGGGCATGAT

Function

NR:

description
uncharacterized protein LOC110506303 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123446 True 1278 lncRNA 0.41 2 5604983 5606316

Neighbor

gene id symbol gene type direction distance location
LOC110506279 LOC106595015 coding upstream 12730 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 32365 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 62116 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 147853 5451499 ~ 5457130 (+)
tg LOC106573164 coding upstream 157783 5348252 ~ 5447200 (+)
jarid2a LOC106573577 coding downstream 9680 5615996 ~ 5753847 (+)
mylipb LOC106596795 coding downstream 205931 5812247 ~ 5839646 (+)
LOC110505528 gmpr coding downstream 235201 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 347665 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 369884 5976200 ~ 6002265 (+)
G108588 LOC106573343 non-coding upstream 2072 5600663 ~ 5602911 (+)
G108583 NA non-coding upstream 29974 5573451 ~ 5575009 (+)
G108616 NA non-coding upstream 70864 5532987 ~ 5534119 (+)
G108615 NA non-coding upstream 72525 5529962 ~ 5532458 (+)
G108613 NA non-coding upstream 75917 5526704 ~ 5529066 (+)
G108621 NA non-coding downstream 6100 5612416 ~ 5613037 (+)
G108622 NA non-coding downstream 7269 5613585 ~ 5614123 (+)
G108623 NA non-coding downstream 7905 5614221 ~ 5614705 (+)
G108652 NA non-coding downstream 33355 5639671 ~ 5642231 (+)
G108653 NA non-coding downstream 38312 5644628 ~ 5646025 (+)
G108354 LOC106573122 other upstream 305050 5296179 ~ 5299933 (+)
G108280 NA other upstream 467991 5136356 ~ 5136992 (+)
G108048 NA other upstream 746709 4857911 ~ 4858274 (+)
G108682 NA other downstream 113649 5719965 ~ 5725579 (+)
G108702 NA other downstream 173898 5780214 ~ 5782921 (+)
G108733 NA other downstream 294195 5900511 ~ 5900950 (+)

Expression


Co-expression Network