G108663


Basic Information

Item Value
gene id G108663
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5661042 ~ 5663859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123546
ccctattccctgcatagtgcactacttttgaccagagctctgggGGTAGTATTGACCTAATTTAGTCAGGAAGGAGATGCTGAGATCACTGAGAGAGAGCTTatcaactgaagagagagagagagagagagcttatcaactgaagagagagagagagagagagcttatcaACTGAAGAGAGAGCGAGCTTatcaactgaagagagagagcttatcaactgaagagagagagagcttatcaACTGAAAAGAGGGAGAGCTTatcaactgaagagagagagagagagtttatcaactgaagagagagagagagcttatcaactgaagagagagagagagagagagagagcttatcaACTGAAGAGAGCGCGAGCTTatcaactgaagagagagagagagcttatcaACTGAAGAGAGAGCGAGCTTATCAACTGAAGAGAGAGCGAGCTTATCAACTGAAGAGGGAGAGcttatcaaatcaaaatgtatttgtcacgtgcgctgaatacaacaggtgtagtagaccttacagggaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgcagaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgcagaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacgagAGAGAGCTTatcaactgaagagagagagagcttatcaactgaagagagagagagagattatcaactgaagagagagagagagagagagagagagagagattatcaactgaagagagagagagagcttatcaactgaagagagagagagagagagagagagagagagagagagagagattatcaaCTGAAGGCAGGAATATTCTAATTACTTCCATTTATTGGCCCAGTGAATCAGTTGGATATTTGTAATTGGGTAATATTGATATCTGTCTCATCTCTTCTTCAcctgagtcccaaatgacaccctattcagtgcact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123546 True 1213 lncRNA 0.42 2 5661042 5663859

Neighbor

gene id symbol gene type direction distance location
LOC110506279 LOC106595015 coding upstream 68789 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 88424 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 118175 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 203912 5451499 ~ 5457130 (+)
tg LOC106573164 coding upstream 213842 5348252 ~ 5447200 (+)
mylipb LOC106596795 coding downstream 148388 5812247 ~ 5839646 (+)
LOC110505528 gmpr coding downstream 177658 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 290122 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 312341 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 314407 5978266 ~ 5979890 (+)
G108653 NA non-coding upstream 15017 5644628 ~ 5646025 (+)
G108652 NA non-coding upstream 18811 5639671 ~ 5642231 (+)
G108623 NA non-coding upstream 46337 5614221 ~ 5614705 (+)
G108622 NA non-coding upstream 46919 5613585 ~ 5614123 (+)
G108621 NA non-coding upstream 48005 5612416 ~ 5613037 (+)
G108675 NA non-coding downstream 43858 5707717 ~ 5709050 (+)
G108676 NA non-coding downstream 45498 5709357 ~ 5710446 (+)
G108677 NA non-coding downstream 47290 5711149 ~ 5711910 (+)
G108685 NA non-coding downstream 69756 5733615 ~ 5775376 (+)
G108643 NA non-coding downstream 93145 5757004 ~ 5757953 (+)
G108354 LOC106573122 other upstream 361109 5296179 ~ 5299933 (+)
G108280 NA other upstream 524050 5136356 ~ 5136992 (+)
G108048 NA other upstream 802768 4857911 ~ 4858274 (+)
G108682 NA other downstream 56106 5719965 ~ 5725579 (+)
G108702 NA other downstream 116355 5780214 ~ 5782921 (+)
G108733 NA other downstream 236652 5900511 ~ 5900950 (+)

Expression


Co-expression Network