G108676


Basic Information

Item Value
gene id G108676
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5709357 ~ 5710446 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123567
gtacactacaatacaaaccagctcacagtcacagtacactacaataccaaccagctcacactcacagtacactacaataccaaccagctcacagtacactacaataccaaccagctcacagtacactacaatacaaaccatctcacactcacagtacactacaatacaaacCAGCTCACACTCACAGTATACTATAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123567 True 200 lncRNA 0.42 2 5709357 5710446

Neighbor

gene id symbol gene type direction distance location
LOC110506279 LOC106595015 coding upstream 117104 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 136739 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 166490 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 252227 5451499 ~ 5457130 (+)
tg LOC106573164 coding upstream 262157 5348252 ~ 5447200 (+)
mylipb LOC106596795 coding downstream 101801 5812247 ~ 5839646 (+)
LOC110505528 gmpr coding downstream 131071 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 243535 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 265754 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 267820 5978266 ~ 5979890 (+)
G108675 NA non-coding upstream 307 5707717 ~ 5709050 (+)
G108663 NA non-coding upstream 45498 5661042 ~ 5663859 (+)
G108653 NA non-coding upstream 63332 5644628 ~ 5646025 (+)
G108652 NA non-coding upstream 67126 5639671 ~ 5642231 (+)
G108623 NA non-coding upstream 94652 5614221 ~ 5614705 (+)
G108677 NA non-coding downstream 703 5711149 ~ 5711910 (+)
G108685 NA non-coding downstream 23169 5733615 ~ 5775376 (+)
G108643 NA non-coding downstream 46558 5757004 ~ 5757953 (+)
G108644 NA non-coding downstream 48156 5758602 ~ 5760920 (+)
G108694 NA non-coding downstream 57500 5767946 ~ 5769067 (+)
G108354 LOC106573122 other upstream 409424 5296179 ~ 5299933 (+)
G108280 NA other upstream 572365 5136356 ~ 5136992 (+)
G108048 NA other upstream 851083 4857911 ~ 4858274 (+)
G108682 NA other downstream 9519 5719965 ~ 5725579 (+)
G108702 NA other downstream 69768 5780214 ~ 5782921 (+)
G108733 NA other downstream 190065 5900511 ~ 5900950 (+)

Expression


Co-expression Network