Gene
RNA
| Item | Value |
|---|---|
| gene id | G109230 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 5711087 ~ 5711741 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| adhesive plaque matrix protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU124338 | True | 436 | lncRNA | 0.49 | 2 | 5711087 | 5711741 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:136493 | NA | coding | downstream | 99748 | 5604963 ~ 5611339 (-) |
| pard6ga | LOC106573343 | coding | downstream | 106360 | 5600622 ~ 5604727 (-) |
| adnp2a | LOC106573358 | coding | downstream | 111058 | 5595279 ~ 5600029 (-) |
| rbfa | LOC106573367 | coding | downstream | 116235 | 5592254 ~ 5594852 (-) |
| ndrg1b | LOC106606139 | coding | downstream | 238620 | 5457853 ~ 5477974 (-) |
| dtnbp1a | dtbp1 | coding | upstream | 42264 | 5754005 ~ 5812038 (-) |
| atxn1b | LOC106597954 | coding | upstream | 148970 | 5860711 ~ 5875088 (-) |
| fam8a1b | LOC106593472 | coding | upstream | 189308 | 5901049 ~ 5911690 (-) |
| fabp4b | fabp4 | coding | upstream | 204476 | 5916217 ~ 5918070 (-) |
| LOC110505572 | LOC106606170 | coding | upstream | 211245 | 5922986 ~ 5925487 (-) |
| G109215 | NA | non-coding | downstream | 24736 | 5684852 ~ 5686351 (-) |
| G109214 | NA | non-coding | downstream | 34241 | 5672802 ~ 5676846 (-) |
| G109213 | NA | non-coding | downstream | 51238 | 5659421 ~ 5659849 (-) |
| G109194 | NA | non-coding | downstream | 126863 | 5584011 ~ 5584224 (-) |
| G109236 | NA | non-coding | upstream | 10217 | 5721958 ~ 5724129 (-) |
| G109238 | NA | non-coding | upstream | 11649 | 5723390 ~ 5724438 (-) |
| G109239 | NA | non-coding | upstream | 18449 | 5730190 ~ 5730609 (-) |
| G109111 | NA | non-coding | upstream | 29505 | 5741246 ~ 5753845 (-) |
| G109248 | NA | non-coding | upstream | 56846 | 5768587 ~ 5769071 (-) |
| LOC110520858 | LOC106606136 | other | downstream | 280330 | 5422229 ~ 5430785 (-) |
| G108477 | NA | other | downstream | 469423 | 5240618 ~ 5241664 (-) |
| G108033 | NA | other | downstream | 866996 | 4843061 ~ 4844091 (-) |
| G107849 | NA | other | downstream | 1159122 | 4550313 ~ 4551965 (-) |
| G107843 | NA | other | downstream | 1171464 | 4539235 ~ 4539623 (-) |
| G109302 | NA | other | upstream | 125936 | 5837677 ~ 5840273 (-) |
| G109273 | LOC106606171 | other | upstream | 171241 | 5882982 ~ 5886155 (-) |
| G109430 | NA | other | upstream | 662169 | 6373910 ~ 6374361 (-) |
| G109469 | LOC106590995 | other | upstream | 674562 | 6386303 ~ 6389236 (-) |
