G108643


Basic Information

Item Value
gene id G108643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5757004 ~ 5757953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123519
ccagGGCCCGTAGTGCTATGGtccaaagcagtgcactataaaaaGGGGAGCCACACAGTGTGTGTTCTGGGTTCCAGCTCACCTCTTCTGTCGGTGATCTGCAGGTAGCCAGTAGAGAGGTACTGATCCATGTCCTGTTGGAAAGCTTCTTCAAAGTACTTCTGCCTCTCCTTCAGCTTCCCCTGCTGGGCGTGCTCCATGTCCAGCACCTTCTGGGCGTGCTCAGAGTCCAGCTCGGCTGGGGGGGAAACAggaagtagaggacagaggtggaTAGAGGGTTGACTTGCTCTCACGGAAGCAGCCATTGAAAAGATAGTAGATGAGCTCTAGTACATTTCTATGGAGGTCAGTAATACCCTCTGGATAGACATAAGGACAAGCCACAGTCAAATGATGACGCCTCAATCATTCATTATTTAATGGAAACATGTTTCACAAATCTGCACTGTGAAGGTCACTGTGTAGGTCACTGTGTAGGTCACTGTGTAAGTCACTATAGAGTTACTGTATAGGTTACTGTGTAGGTCACTGTGTAGGTCACTGTATAAGTCactgtatagttactgtatagGTTACTGTATGGTTACTGTATAAGTCACTGTGTAGGTCACTGTAGGTCACTGTACAGTTACTGAATATAAACAAGTCATTGTTTGGTATTCCTGTTAAGCTGAATGGGAAGTGGCAGCTTTTTGTCAGAGTTACCTCCGCTCTTTTCTAGTGCCCCCAAATCCATTGACCACATACATACAGGTTGGGACGCAACCTGTAGTTAGCCGTTTACATCAGATAAATGTCTTCTCACTATTACAATGATCAACATCATCCTATAGATATCATCAGATAAATGTCTTCTCACTATTATAATGATCAACATCATCCTACAGATATCATCAGATAAATGTCTTCTCACTATTATAATGATC

Function

NR:

description
dysbindin-A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123519 True 929 lncRNA 0.41 2 5757004 5757953

Neighbor

gene id symbol gene type direction distance location
jarid2a LOC106573577 coding upstream 3157 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 164751 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 184386 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 214137 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 299874 5451499 ~ 5457130 (+)
mylipb LOC106596795 coding downstream 54294 5812247 ~ 5839646 (+)
LOC110505528 gmpr coding downstream 83564 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 196028 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 218247 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 220313 5978266 ~ 5979890 (+)
G108677 NA non-coding upstream 45094 5711149 ~ 5711910 (+)
G108676 NA non-coding upstream 46558 5709357 ~ 5710446 (+)
G108675 NA non-coding upstream 47954 5707717 ~ 5709050 (+)
G108663 NA non-coding upstream 93145 5661042 ~ 5663859 (+)
G108653 NA non-coding upstream 110979 5644628 ~ 5646025 (+)
G108644 NA non-coding downstream 649 5758602 ~ 5760920 (+)
G108694 NA non-coding downstream 9993 5767946 ~ 5769067 (+)
G108697 NA non-coding downstream 16427 5774380 ~ 5774708 (+)
G108698 NA non-coding downstream 17954 5775907 ~ 5779231 (+)
G108699 NA non-coding downstream 18917 5776870 ~ 5778747 (+)
G108682 NA other upstream 31425 5719965 ~ 5725579 (+)
G108354 LOC106573122 other upstream 457071 5296179 ~ 5299933 (+)
G108280 NA other upstream 620012 5136356 ~ 5136992 (+)
G108702 NA other downstream 22261 5780214 ~ 5782921 (+)
G108733 NA other downstream 142558 5900511 ~ 5900950 (+)
G108775 LOC106606109 other downstream 299043 6056996 ~ 6058335 (+)

Expression


Co-expression Network