G108698


Basic Information

Item Value
gene id G108698
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 5775907 ~ 5779231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123607
GGTCATTAAACTAATGAGCGTGCACATCAATTACATTGAGATGTTGAGCAAAACCACAGTCATGATGATGTTCTCTTTCAGGTCTGTCTGCCAGACGGCGTCTCAGTCCAGGACgattctgtcacacacacacgcctgtcacacacacacacacacacacacacacacacacacaaaaccgcTAGAAATAGTGAGTTCTGTATTGAATTGATCTGCATCCCATTCAGCGAGAGTGACAGGCCCTTTAGTGGAGATCCATCATATTATGATCCGGTATAAAGTAAAGATGGAGTGATTCTATTGGAGGTGAAGTAACGTTGTAATGTCACACTGTTCATTCTATTGGAGGTGAAGTAACATTGTAATGTCACACTGTTCATTCTATTGGAggtgatgtaatgttgtaatgtcacACTGTTCATTCTATTGGAGGTGAAGTAACGTTGTAATGTCACACTGTTCATTCTATTGGAGGTGAAGTAACGTTGTAATGTCACACTGTTCATTCTATTGGAGGTGAAGTAACATTGTAATGTCACACTGTTCATTCTATTGGAGGTGAAGTAACGTAATGTCACACTGTTCATTCTATTGGAGGTGAAGTAATGTTGTAATGTCACACTGTTCATTCTATTGGAGGTGATGTAACGTTGTAATGTCACACTGTTCATTCTATTGGAGGTGAAGTAACGTTGTAATGTCACACTGTTCATTCTATTGGAGGTGAAGTAACATTGTAATGTCACACTGTTCATTCTATTGGAggtgatgtaatgttgtaatgtcacactgttcattctattggaggtgatgtaatgttgtaatgtcacactgttcattctattggaggtgatgtaacgttgtaatgtcacactgttcattctattggaggtgatgtaacgttgtaatgtcacactgttcattctattggaggtgaagtaacgttgtaatgtcacactgttcattctattgg

Function

NR:

description
PREDICTED: actin cytoskeleton-regulatory complex protein pan1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123607 True 973 lncRNA 0.39 3 5775907 5779231

Neighbor

gene id symbol gene type direction distance location
jarid2a LOC106573577 coding upstream 22060 5615996 ~ 5753847 (+)
LOC110506279 LOC106595015 coding upstream 183654 5575366 ~ 5592253 (+)
dync1i1 LOC105016552 coding upstream 203289 5542994 ~ 5572618 (+)
ptp4a3b LOC106596188 coding upstream 233040 5480975 ~ 5542867 (+)
ccn4b wisp1 coding upstream 318777 5451499 ~ 5457130 (+)
mylipb LOC106596795 coding downstream 33016 5812247 ~ 5839646 (+)
LOC110505528 gmpr coding downstream 62286 5841517 ~ 5854355 (+)
LOC110505637 LOC106573538 coding downstream 174750 5953886 ~ 5958813 (+)
LOC110505679 LOC106579367 coding downstream 196969 5976200 ~ 6002265 (+)
LOC118937375 NA coding downstream 199035 5978266 ~ 5979890 (+)
G108685 NA non-coding upstream 531 5733615 ~ 5775376 (+)
G108697 NA non-coding upstream 1199 5774380 ~ 5774708 (+)
G108694 NA non-coding upstream 6840 5767946 ~ 5769067 (+)
G108644 NA non-coding upstream 14987 5758602 ~ 5760920 (+)
G108643 NA non-coding upstream 17954 5757004 ~ 5757953 (+)
G108702 NA non-coding downstream 983 5780214 ~ 5782921 (+)
G108707 NA non-coding downstream 24855 5804086 ~ 5805042 (+)
G108709 NA non-coding downstream 27190 5806421 ~ 5806940 (+)
G108712 NA non-coding downstream 54425 5833656 ~ 5834519 (+)
G108682 NA other upstream 50328 5719965 ~ 5725579 (+)
G108354 LOC106573122 other upstream 475974 5296179 ~ 5299933 (+)
G108280 NA other upstream 638915 5136356 ~ 5136992 (+)
G108733 NA other downstream 121280 5900511 ~ 5900950 (+)
G108775 LOC106606109 other downstream 277765 6056996 ~ 6058335 (+)

Expression


Co-expression Network