G108775 (LOC106606109)


Basic Information

Item Value
gene id G108775
gene name LOC106606109
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6056996 ~ 6058335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123712
CATCTTAGAAAAACACACACCATGACGTTAGAATATACACAAGAATAAGTGATTGATTGTTACATCACGATAATGTTCTGGATAGCCAGCCACACCAGCAACCATGATAGGAGAGAGGCAGTGACTAGCAACACGGATAGTACATCACTGATTTGAGGCATCCCAATGTCTTTAAGATggagtagctgagagagagagagagagtcatcatGCATCCTCAGTCAAAGATGTTTGCGATTGCCCCTTCACGCTTGAAAACCTTTCTAACACTATATTACAATGAATGTATGATCAAATATTTACAAAGGTCTTAAAATTCACCACTGATTGTTAATATGAACAGAATGCCTTTATTTCATGTAAAGAATATTCTACAGAGTATTTCATCTCCCCTGGCATGCCATGCCATCCCACTGGTCGAGAAGGAGGGCTGTTtgccccatccatcctctcctatGTCCACAAGGGTCCTATTCATTAGTACACGCCGCAGCAGTATGTTTCGCAAcggaaaacaaacatttcttattGGTTCAAGTTCAGGTCGTCACTCCCTGATTCAGTCCGTTTTCTTGCGTTTGGTTCCTAATGAATGCCACCCAGTCTTATCAGGCTCATGAGGAAGGCTCTGTggcaccctacatagtgcactacttttgacctttagcttaccagtagtgcactatgtagggaatagggtgccatttgggacccaccATGGCTCCTtcctcagaccacagacaccCCCTGGGCAGGGCAGGTGAGAGCTGCGGCTACGTCGGACCTCTCGATGCGGGCCAGCGCCGAGCACAGAAGCCCCAGAGTGGAGCCCTCCTGCTGAGCCCAGTTGGAAAGGAGGGTGTGTACAGGGGCCTCGCCGTGCCCAAACAGGTCCATCTGCTCGGGCTCGTAGCCCAGCACGGCCCCCAGGGTCCTCCAGGAGCCTCTGCGGCTCCCGCTCCCCTCCTGGAGCAGACGCTCCACCTCCTCCTGTCTGTGGGGGGGCAGGTTGATGTACAGACGGCCGTCCTGCTTACTGTCCC

Function

NR:

description
death domain-containing membrane protein NRADD-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123712 True 1043 TUCP 0.51 2 6056996 6058335

Neighbor

gene id symbol gene type direction distance location
setd2 LOC106593284 coding upstream 7495 6002992 ~ 6049501 (+)
LOC110505679 LOC106579367 coding upstream 54731 5976200 ~ 6002265 (+)
LOC118937375 NA coding upstream 77106 5978266 ~ 5979890 (+)
LOC110505637 LOC106573538 coding upstream 101551 5953886 ~ 5958813 (+)
LOC110505528 gmpr coding upstream 202822 5841517 ~ 5854355 (+)
LOC118937376 NA coding downstream 33744 6092079 ~ 6093940 (+)
ccdc12 ccd12 coding downstream 173034 6231369 ~ 6250042 (+)
cep72 LOC106573558 coding downstream 228223 6286558 ~ 6312599 (+)
trip13 LOC106590995 coding downstream 320038 6378373 ~ 6389788 (+)
nkd2b LOC106574162 coding downstream 344341 6402676 ~ 6499698 (+)
G108760 NA non-coding upstream 60870 5995802 ~ 5996126 (+)
G108758 NA non-coding upstream 63197 5993533 ~ 5993799 (+)
G108756 NA non-coding upstream 73225 5983276 ~ 5983771 (+)
G108627 NA non-coding upstream 94871 5955703 ~ 5962125 (+)
G108648 NA non-coding upstream 108655 5947511 ~ 5948341 (+)
G108789 NA non-coding downstream 24801 6083136 ~ 6085913 (+)
G108773 NA non-coding downstream 28841 6087176 ~ 6087617 (+)
G108779 LOC106573589 non-coding downstream 59502 6117837 ~ 6119044 (+)
G108799 NA non-coding downstream 75041 6133376 ~ 6134440 (+)
G108733 NA other upstream 156046 5900511 ~ 5900950 (+)
G108702 NA other upstream 274352 5780214 ~ 5782921 (+)
G108682 NA other upstream 331417 5719965 ~ 5725579 (+)
G108805 LOC106594197 other downstream 138597 6151712 ~ 6199341 (+)
G108874 LOC106573552 other downstream 223736 6282071 ~ 6285940 (+)
G109020 NA other downstream 574743 6633078 ~ 6633913 (+)
rbm24b LOC106596654 other downstream 797751 6855864 ~ 6868976 (+)
malsu1 malsu1 other downstream 850212 6908511 ~ 6911256 (+)

Expression


Co-expression Network