XLOC_020852 (BX511034.4)


Basic Information

Item Value
gene id XLOC_020852
gene name BX511034.4
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 7439255 ~ 7442462 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041066
GTTCTGTTTACCCAGCAGCCACGTTGTTCCTGTTCCAGTTGGGGTGGATGTAGACATTGCTGACGGTCATGTACTGCTCACGGCCCTCCTGTTTGTAGATGTCGTGCTCACCGAGGACAACACGCCAAGTTCTTGAGCTACACAAGATGGAAGAAGAAATGTTAATTGTATACGGGCCTACTGCCTTTTCACATCCTTAATGTCGAAAGTGGTAAAAAGTCATttgacaataaatgaatgaagAGACAAAAGACGTGGATTCCTTACGTATCAACGCAGTGAGCGGCGGTCAAAACAAAGTTCTGTTTGATCAGAGTTCCACCACAGaaagagagaaagatcTTACCCAAAGCGGCCAGCACACTCAACAACAGGATCCTCAGCATGTTTGCAGTCTTTCTGGACCTTCTGCACTCTGAGCTCCTCCATCATCCCTATATATACACACCCACAGACGGTCAAGCGGCGCTGGACACAACAGGTTTTCTGATGCTTACAGGTGTGTGAATCCCACCGATAACACCGGTGCCAAGGCCAGCGTGCCAGATGCAGAATAAGCAATTTTTTCTGCTTTGATAATGTTTAACCTGAATAAGTTAAACAATAAGTCTTATATACAGTAatgtaaagtttaaataaatgcacacatTTTAACGCTCCTA
>TCONS_00041067
GTTCTGTTTACCCAGCAGCCACGTTGTTCCTGTTCCAGTTGGGGTGGATGTAGACATTGCTGACGGTCATGTACTGCTCACGGCCCTCCTGTTTGTAGATGTCGTGCTCACCGAGGACAACACGCCAAGTTCTTGAGCTACACAAGATGGAAGAAGAAATGTTAATTGTATACGGGCCTACTGCCTTTTCACATCCTTAATGTCGAAAGTGGTAAAAAGTCATttgacaataaatgaatgaagaaagagagaaagatcTTACCCAAAGCGGCCAGCACACTCAACAACAGGATCCTCAGCATGTTTGCAGTCTTTCTGGACCTTCTGCACTCTGAGCTCCTCCATCATCCCTATATATACACACCCACAGACGGTCAAGCGGCGCTGGACACAACAGGTTTTCTGATGCTTACAGGTGTGTGAATCCCACCGATAACACCGGTGCCAAGGCCAGCGTGCCAGATGCAGAATAAGCAATTTTTTCTGCTTTGATAATGTTTAACC

Function

GO:

id name namespace
GO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099295

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041066 False 662 lncRNA 0.44 3 7439255 7442462
TCONS_00041067 True 504 lncRNA 0.47 2 7439329 7442462

Neighbor

gene id symbol gene type direction distance location
XLOC_020851 NA coding downstream 15787 7422884 ~ 7423468 (-)
XLOC_020849 si:dkey-57c15.1 coding downstream 38784 7359679 ~ 7400471 (-)
XLOC_020848 asic1b coding downstream 270684 7044625 ~ 7168571 (-)
XLOC_020847 smarcd1 coding downstream 413862 7009062 ~ 7025393 (-)
XLOC_020846 gpd1b coding downstream 432281 6996046 ~ 7006974 (-)
XLOC_020853 BX511034.2 coding upstream 2555 7445017 ~ 7457247 (-)
XLOC_020854 BX511034.6 coding upstream 17567 7460029 ~ 7461603 (-)
XLOC_020855 BX511034.5 coding upstream 80266 7522728 ~ 7539414 (-)
XLOC_020856 BX511034.1 coding upstream 100010 7542472 ~ 7563593 (-)
XLOC_020857 NA coding upstream 169542 7612004 ~ 7622403 (-)
XLOC_020838 FO904898.6 non-coding downstream 620727 6809366 ~ 6818528 (-)
XLOC_020835 NA non-coding downstream 686229 6727540 ~ 6753026 (-)
XLOC_020834 NA non-coding downstream 727739 6696517 ~ 6711516 (-)
XLOC_020833 CR352226.3 non-coding downstream 776349 6661712 ~ 6662906 (-)
XLOC_020858 BX511034.3 non-coding upstream 172210 7614672 ~ 7617991 (-)
XLOC_020860 NA non-coding upstream 206557 7649019 ~ 7651852 (-)
XLOC_020866 NA non-coding upstream 682466 8124928 ~ 8126055 (-)
XLOC_020867 NA non-coding upstream 698149 8140611 ~ 8153399 (-)

Expression


Co-expression Network