Gene
RNA
| Item | Value |
|---|---|
| gene id | G109011 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 6588164 ~ 6588628 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU124043 | True | 437 | lncRNA | 0.35 | 2 | 6588164 | 6588628 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nkd2b | LOC106574162 | coding | upstream | 88466 | 6402676 ~ 6499698 (+) |
| trip13 | LOC106590995 | coding | upstream | 198376 | 6378373 ~ 6389788 (+) |
| cep72 | LOC106573558 | coding | upstream | 275565 | 6286558 ~ 6312599 (+) |
| ccdc12 | ccd12 | coding | upstream | 338122 | 6231369 ~ 6250042 (+) |
| LOC118937376 | NA | coding | upstream | 494224 | 6092079 ~ 6093940 (+) |
| LOC118937387 | NA | coding | downstream | 30482 | 6619110 ~ 6621596 (+) |
| LOC110505995 | LOC106573077 | coding | downstream | 56588 | 6645216 ~ 6649794 (+) |
| ptdss1a | LOC106595791 | coding | downstream | 64574 | 6653202 ~ 6684816 (+) |
| LOC110505984 | LOC106574154 | coding | downstream | 97272 | 6685900 ~ 6688012 (+) |
| kif13a | kif13a | coding | downstream | 100263 | 6688891 ~ 6839464 (+) |
| G109003 | NA | non-coding | upstream | 16034 | 6571618 ~ 6572130 (+) |
| G108994 | NA | non-coding | upstream | 28657 | 6558895 ~ 6559507 (+) |
| G108951 | NA | non-coding | upstream | 116189 | 6464756 ~ 6471975 (+) |
| G108943 | NA | non-coding | upstream | 152159 | 6434037 ~ 6436005 (+) |
| G108911 | NA | non-coding | upstream | 201444 | 6386330 ~ 6386720 (+) |
| G109015 | NA | non-coding | downstream | 10295 | 6598923 ~ 6600166 (+) |
| G109018 | NA | non-coding | downstream | 35042 | 6623670 ~ 6624211 (+) |
| G109019 | NA | non-coding | downstream | 36328 | 6624956 ~ 6626013 (+) |
| G109030 | NA | non-coding | downstream | 74641 | 6663269 ~ 6664730 (+) |
| G108874 | LOC106573552 | other | upstream | 302224 | 6282071 ~ 6285940 (+) |
| G108805 | LOC106594197 | other | upstream | 388823 | 6151712 ~ 6199341 (+) |
| G108775 | LOC106606109 | other | upstream | 529829 | 6056996 ~ 6058335 (+) |
| LOC110505679 | LOC106579367 | other | upstream | 585970 | 5976200 ~ 6002265 (+) |
| LOC110505637 | LOC106573538 | other | upstream | 629351 | 5953886 ~ 5958813 (+) |
| G109020 | NA | other | downstream | 44450 | 6633078 ~ 6633913 (+) |
| rbm24b | LOC106596654 | other | downstream | 267458 | 6855864 ~ 6868976 (+) |
| malsu1 | malsu1 | other | downstream | 319919 | 6908511 ~ 6911256 (+) |
| LOC110535156 | LOC106606167 | other | downstream | 352888 | 6941465 ~ 6944043 (+) |
| G109821 | NA | other | downstream | 546619 | 7135247 ~ 7140979 (+) |
