G109018


Basic Information

Item Value
gene id G109018
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6623670 ~ 6624211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU124052
CCCACCCACTGTCATCCAACATCATCCTGTCCAATCAGGTTTCCTAACCCACCCACTGTCATCCAACATCATCCTGTCCTATCAGGTTTCCTAACCCACCCACTGTCATCCAACATCATCCTGTCCAATAAGGTTTCCTAACCCACCCACTGTCATCCAACATCATCCTGTCCAATCAGGTTTCCTAACCCACCCACTGTCATCCAACATCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU124052 True 213 lncRNA 0.37 2 6623670 6624211

Neighbor

gene id symbol gene type direction distance location
LOC118937387 NA coding upstream 2074 6619110 ~ 6621596 (+)
nkd2b LOC106574162 coding upstream 123972 6402676 ~ 6499698 (+)
trip13 LOC106590995 coding upstream 233882 6378373 ~ 6389788 (+)
cep72 LOC106573558 coding upstream 311071 6286558 ~ 6312599 (+)
ccdc12 ccd12 coding upstream 373628 6231369 ~ 6250042 (+)
LOC110505995 LOC106573077 coding downstream 21005 6645216 ~ 6649794 (+)
ptdss1a LOC106595791 coding downstream 28991 6653202 ~ 6684816 (+)
LOC110505984 LOC106574154 coding downstream 61689 6685900 ~ 6688012 (+)
kif13a kif13a coding downstream 64680 6688891 ~ 6839464 (+)
LOC110506079 NA coding downstream 216821 6841032 ~ 6842093 (+)
G108991 NA non-coding upstream 87 6556041 ~ 6623583 (+)
G109015 NA non-coding upstream 23504 6598923 ~ 6600166 (+)
G109011 NA non-coding upstream 35042 6588164 ~ 6588628 (+)
G109003 NA non-coding upstream 51540 6571618 ~ 6572130 (+)
G108994 NA non-coding upstream 64163 6558895 ~ 6559507 (+)
G109019 NA non-coding downstream 745 6624956 ~ 6626013 (+)
G109030 NA non-coding downstream 39058 6663269 ~ 6664730 (+)
G109032 NA non-coding downstream 46487 6670698 ~ 6672100 (+)
G108930 NA non-coding downstream 84913 6709124 ~ 6753929 (+)
G108874 LOC106573552 other upstream 337730 6282071 ~ 6285940 (+)
G108805 LOC106594197 other upstream 424329 6151712 ~ 6199341 (+)
G108775 LOC106606109 other upstream 565335 6056996 ~ 6058335 (+)
LOC110505679 LOC106579367 other upstream 621476 5976200 ~ 6002265 (+)
LOC110505637 LOC106573538 other upstream 664857 5953886 ~ 5958813 (+)
G109020 NA other downstream 8867 6633078 ~ 6633913 (+)
rbm24b LOC106596654 other downstream 231875 6855864 ~ 6868976 (+)
malsu1 malsu1 other downstream 284336 6908511 ~ 6911256 (+)
LOC110535156 LOC106606167 other downstream 317305 6941465 ~ 6944043 (+)
G109821 NA other downstream 511036 7135247 ~ 7140979 (+)

Expression


Co-expression Network