G108930


Basic Information

Item Value
gene id G108930
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6709124 ~ 6753929 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU123939
CAGTCAAACGCAGACTGGAAGCTGGAAGTTAAAATGCCTTAGTTAGTGGTCTTCAGAGCCTGAGTCATGCTTTTCACCCAGTCAAACGCAGACTGGAAGCTGGAAGTTAACATGCCTTAGTTAGTGGTCTTCAGAGCCTGAGTCATACTTTTCACCCAGTCAAACGCAGACTGGAAGCTGGAAGTTAAAATGCCTTAGTTAGTGGTCTTCAGAGCCTGAGTCATGCTTTTCACCCAGTCAAACGCAGACTGGAAGCTGGAAGTTAAAATGCCTTAGTTAGTGGTCTTCAGAGCCTGAGTCATGCTTTTCACCCAGTCAAATGCAGACTGGAAGCTGGAAGTTATGTTTATGTCATGCTTCATTCTGGCCTTcttgaccctgttacagatgttCCTCAGCGTTTTGACCAGAAGCTGTTTCTCAGAAACATGCAATGTCAAGGAGATGCCTACAGGATAGACACATAGGGCTAAACAAAGATGGTGGACGTATGGCGCTGCTTAAATACATTTAAGAGGAGGCTCAGGATGCCTCAAAAatgacctatagtgcactacttttgaccacatctggtccaaaatagtgcactatatggggaatagggtggcatttgagaCACTCTTTATGTATTCCTGCGTGGCCCTGCAGATGCACAACAAGAACAGGAAGCTTCAGTGTTTCTGATCACGCTAACTCAAGCTGGTGAATCGCTCAGCCCCGTATCCTTCCTCCCCAACACTAATGATTAGATCCTTGATCCGCTCTTCCTGTCCTGAAGAACAACCTGGAGCGGAGTGACACACCTTGGAAACAAAGGCTTTGGAGACCGCAGATAATATGGGATAGTCTGTATCTTCCCTGCTGTCACAGGGCTAACAGACACATTCAGAAGAGAGACTGTATACATGCAGGGATACTTAgagatgtgtttgatgtgttgtCTTCTATAAATCCCCATTAATTTAGTAGTTCTGGTGTATTGGAGGGTAGAGTGTTCTACATGCAGGGATACTTAGAGATACTTACAGTATTTCTACATGCAGGGTTTCAGTTTTCCAGTAGTTGTGGtgtatttctacatgcagggtttcagtttgccagtagttgtggtgtatttctacatgcagggtttcagtttgccagtagttgtagtgtatttctacatgcagggtttcagtttgccagtagttgtggtgtatttctacatgcagggtttcagtttgccagtagttgtggtgtatttctacatgcagggtttcagtttgccagtagttgtggtgtatttctacatgcagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123939 True 1296 lncRNA 0.44 2 6709124 6753929

Neighbor

gene id symbol gene type direction distance location
LOC110505984 LOC106574154 coding upstream 21112 6685900 ~ 6688012 (+)
ptdss1a LOC106595791 coding upstream 24308 6653202 ~ 6684816 (+)
LOC110505995 LOC106573077 coding upstream 59330 6645216 ~ 6649794 (+)
zgc:158766 LOC106590969 coding upstream 79655 6545368 ~ 6629469 (+)
LOC118937387 NA coding upstream 87528 6619110 ~ 6621596 (+)
LOC110506079 NA coding downstream 87103 6841032 ~ 6842093 (+)
rbm24b LOC106596654 coding downstream 101935 6855864 ~ 6868976 (+)
grinab grina coding downstream 122058 6875987 ~ 6889713 (+)
LOC118937417 LOC106592634 coding downstream 137519 6891448 ~ 6896287 (+)
smpd5 LOC106577403 coding downstream 143569 6897498 ~ 6908200 (+)
G109032 NA non-coding upstream 37024 6670698 ~ 6672100 (+)
G109030 NA non-coding upstream 44394 6663269 ~ 6664730 (+)
G109019 NA non-coding upstream 83111 6624956 ~ 6626013 (+)
G109018 NA non-coding upstream 84913 6623670 ~ 6624211 (+)
G108934 NA non-coding downstream 38082 6792011 ~ 6793179 (+)
G109072 NA non-coding downstream 58865 6812794 ~ 6813416 (+)
G109080 NA non-coding downstream 89947 6843876 ~ 6844930 (+)
G109070 NA non-coding downstream 105743 6859672 ~ 6863903 (+)
G109085 NA non-coding downstream 110134 6864063 ~ 6864303 (+)
G109020 NA other upstream 75211 6633078 ~ 6633913 (+)
G108874 LOC106573552 other upstream 423184 6282071 ~ 6285940 (+)
G108805 LOC106594197 other upstream 509783 6151712 ~ 6199341 (+)
G108775 LOC106606109 other upstream 650789 6056996 ~ 6058335 (+)
LOC110505679 LOC106579367 other upstream 706930 5976200 ~ 6002265 (+)
malsu1 malsu1 other downstream 154618 6908511 ~ 6911256 (+)
LOC110535156 LOC106606167 other downstream 187587 6941465 ~ 6944043 (+)
G109821 NA other downstream 381318 7135247 ~ 7140979 (+)
pde11al LOC106573285 other downstream 549099 7282430 ~ 7304709 (+)

Expression


Co-expression Network