Gene
RNA
| Item | Value |
|---|---|
| gene id | G108934 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 6792011 ~ 6793179 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ice nucleation protein-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123943 | True | 347 | lncRNA | 0.30 | 2 | 6792011 | 6793179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505984 | LOC106574154 | coding | upstream | 103999 | 6685900 ~ 6688012 (+) |
| ptdss1a | LOC106595791 | coding | upstream | 107195 | 6653202 ~ 6684816 (+) |
| LOC110505995 | LOC106573077 | coding | upstream | 142217 | 6645216 ~ 6649794 (+) |
| zgc:158766 | LOC106590969 | coding | upstream | 162542 | 6545368 ~ 6629469 (+) |
| LOC110506079 | NA | coding | downstream | 47853 | 6841032 ~ 6842093 (+) |
| rbm24b | LOC106596654 | coding | downstream | 62685 | 6855864 ~ 6868976 (+) |
| grinab | grina | coding | downstream | 82808 | 6875987 ~ 6889713 (+) |
| LOC118937417 | LOC106592634 | coding | downstream | 98269 | 6891448 ~ 6896287 (+) |
| smpd5 | LOC106577403 | coding | downstream | 104319 | 6897498 ~ 6908200 (+) |
| G108930 | NA | non-coding | upstream | 38082 | 6709124 ~ 6753929 (+) |
| G109032 | NA | non-coding | upstream | 119911 | 6670698 ~ 6672100 (+) |
| G109030 | NA | non-coding | upstream | 127281 | 6663269 ~ 6664730 (+) |
| G109019 | NA | non-coding | upstream | 165998 | 6624956 ~ 6626013 (+) |
| G109072 | NA | non-coding | downstream | 19615 | 6812794 ~ 6813416 (+) |
| G109080 | NA | non-coding | downstream | 50697 | 6843876 ~ 6844930 (+) |
| G109070 | NA | non-coding | downstream | 66493 | 6859672 ~ 6863903 (+) |
| G109085 | NA | non-coding | downstream | 70884 | 6864063 ~ 6864303 (+) |
| G109069 | NA | non-coding | downstream | 76421 | 6869600 ~ 6870945 (+) |
| G109020 | NA | other | upstream | 158098 | 6633078 ~ 6633913 (+) |
| G108874 | LOC106573552 | other | upstream | 506071 | 6282071 ~ 6285940 (+) |
| G108805 | LOC106594197 | other | upstream | 592670 | 6151712 ~ 6199341 (+) |
| G108775 | LOC106606109 | other | upstream | 733676 | 6056996 ~ 6058335 (+) |
| LOC110505679 | LOC106579367 | other | upstream | 789817 | 5976200 ~ 6002265 (+) |
| malsu1 | malsu1 | other | downstream | 115368 | 6908511 ~ 6911256 (+) |
| LOC110535156 | LOC106606167 | other | downstream | 148337 | 6941465 ~ 6944043 (+) |
| G109821 | NA | other | downstream | 342068 | 7135247 ~ 7140979 (+) |
| pde11al | LOC106573285 | other | downstream | 509849 | 7282430 ~ 7304709 (+) |
