XLOC_020858 (BX511034.3)


Basic Information

Item Value
gene id XLOC_020858
gene name BX511034.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 7614672 ~ 7617991 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041072
acagggcagcacggtggcgcagagggtagcacgtttgcctcacagcaagaaggtctctgcttcgagcttcggctgggtcagttggcgtttctgtgtgaagtttacatgctctccccgtgttggcgtgggtttcctccgggtgctccggttttcccaagtccaaagacataggtgaattggattGGTGTACGCTGATGGTCTGCTGAGAATTCTGCTGAGTTGAAGGGATCCTCCTGTCAGACAACCTCTCCAAAGTACAATAGGACTAgGTTCTTACTACAAGGATTAGTTTTGGCTACTGCAGTCCCGGTTTGGGCCAGCCTCATTTGTGAAGACTAAAGATGAAGACAACATACAAGAAAAATTTAGAGGATGGCGACACTTTTTATTCCACCTAAATATTCCCTTTTATGTGTAAGCAACATtccacaagacaaaacaaaagtaaatgacaggttatttcttttaattttgtctgttttcttggaacattgtacacaatttacaaccagttatatatatatatatatatatatatatatatataggtcagagcaagaaaatgttgttttcttctggagaaagtcttatttcttttatttcggctagaatacaaacagttttgaattttttaaaaaacattttaaggtcaatattattagcccctttaagcaatttttttcgactgtctacagaacaaaccatcgatatacaataacttgcctaattaccctaacctgcctagttaagctataattaacctagttaagcctttaaatgtcactttaagctgtatagaagtgtcttgaagaatatctagtcaaatattatttactcagttattataaatgagttattaaaactattgtgattagaaatgtgttaaaaaatatttccgttaaacagaaattaatggatgtatatatataatgacaaaatctgttttgtgtcgtgcattagagtttgcttaaaaaactggttatctctgagaaagtattgttattttatattattgatgtgttattagttcagaggatattgcaaattgttgaatgccatttataaaaaaaaaaattactacagactttaataagattttatcagacaattactttaatttgtatgattttatttactactgtaaatattgtttgcttggtatttattttgtgtttgtgtactcttttattattgtaactccctgaagaaagtcttttggatACTGAACACATGACTGGTATTATCATGACTGGTATTAAAATTATAGCCttggaaacatgcattttctttaacactatttaagaaattataagcattataacGTGTGCTTACAcaagttatttgtgtttttactatagtaaactatagtcacccttagtgtacatgttttgaagtacttgtaAATATTCCTATGGTCTTAATGTAAATGCTGCAATGGACTTTGTATTTAAAACCTTTATTGCACAGCAGTTCAGCCATGGTTATAGTAcaacttgttggttttgttttaaacgtggtaaaacatggttatgtgtgataaaagtatgtcaatctatttgtatgtttgtgaaaatattaataaatcttcaactgtta
>TCONS_00041073
acagggcagcacggtggcgcagagggtagcacgtttgcctcacagcaagaaggtctctgcttcgagcttcggctggattGGTGTACGCTGATGGTCTGCTGAGAATTCTGCTGAGTTGAAGGGATCCTCCTGTCAGACAACCTCTCCAAAGTACAATAGGACTAgGTTCTTACTACAAGGATTAGTTTTGGCTACTGCAGTCCCGGTTTGGGCCAGCCTCATTTGTGAAGACTAAAGATGAAGACAACATACAAGAAAAATTTAGAGGATGGCGACACTTTTTATTCCACCTAAATATTCCCTTTTATGTGTAAGCAACATtccacaagacaaaacaaaagtaaatgacaggttatttcttttaattttgtctgttttcttggaacattgtacacaatttacaaccagttatatatatatatata

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093642

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041072 False 1596 processed_transcript 0.33 3 7614672 7617991
TCONS_00041073 True 425 processed_transcript 0.41 3 7615739 7617991

Neighbor

gene id symbol gene type direction distance location
XLOC_020856 BX511034.1 coding downstream 51079 7542472 ~ 7563593 (-)
XLOC_020855 BX511034.5 coding downstream 75258 7522728 ~ 7539414 (-)
XLOC_020854 BX511034.6 coding downstream 153069 7460029 ~ 7461603 (-)
XLOC_020853 BX511034.2 coding downstream 157425 7445017 ~ 7457247 (-)
XLOC_020852 BX511034.4 coding downstream 172210 7439255 ~ 7442462 (-)
XLOC_020859 BX511034.7 coding upstream 6608 7624599 ~ 7642967 (-)
XLOC_020860 NA coding upstream 31028 7649019 ~ 7651852 (-)
XLOC_020861 AL929276.2 coding upstream 50443 7668434 ~ 7669624 (-)
XLOC_020862 si:ch211-59h6.1 coding upstream 57397 7675388 ~ 7702958 (-)
XLOC_020863 si:ch73-44m9.3 coding upstream 140471 7758462 ~ 7809981 (-)
XLOC_020851 NA non-coding downstream 191204 7422884 ~ 7423468 (-)
XLOC_020838 FO904898.6 non-coding downstream 796144 6809366 ~ 6818528 (-)
XLOC_020835 NA non-coding downstream 861646 6727540 ~ 6753026 (-)
XLOC_020834 NA non-coding downstream 903156 6696517 ~ 6711516 (-)
XLOC_020866 NA non-coding upstream 506937 8124928 ~ 8126055 (-)
XLOC_020867 NA non-coding upstream 522620 8140611 ~ 8153399 (-)
XLOC_020870 NA non-coding upstream 666943 8284934 ~ 8292299 (-)
XLOC_020873 CABZ01061495.2 non-coding upstream 728084 8346075 ~ 8346200 (-)

Expression


Co-expression Network