G109738


Basic Information

Item Value
gene id G109738
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6896423 ~ 6896670 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125027
tcattacacagatccaccttgtgctggggacaataaaaggccactttaaaatgagcagttttatcacacaacacaatgccatagatgtctccAGTTTTAAAATgagcagttttatcacacaacacaatgccatagatgtctccAGTTTTAAAATgagcagttttatcacacaacaacaatgccatagatgtctccAGTTTTGAGAcatggtgactgcaggaatgaaccaccagagctgttgccagaga

Function

NR:

description
hypothetical protein EH28_06569

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125027 True 248 lncRNA 0.40 1 6896423 6896670

Neighbor

gene id symbol gene type direction distance location
LOC118937417 LOC106592634 coding upstream 136 6891448 ~ 6896287 (+)
grinab grina coding upstream 6710 6875987 ~ 6889713 (+)
rbm24b LOC106596654 coding upstream 29823 6855864 ~ 6868976 (+)
LOC110506079 NA coding upstream 54330 6841032 ~ 6842093 (+)
kif13a kif13a coding upstream 56959 6688891 ~ 6839464 (+)
smpd5 LOC106577403 coding downstream 828 6897498 ~ 6908200 (+)
malsu1 malsu1 coding downstream 11841 6908511 ~ 6911256 (+)
stk31 LOC106595692 coding downstream 15419 6912089 ~ 6938750 (+)
LOC110535156 LOC106606167 coding downstream 44795 6941465 ~ 6944043 (+)
mpp6a LOC106594438 coding downstream 47595 6944265 ~ 6994715 (+)
G109092 NA non-coding upstream 16867 6879274 ~ 6879556 (+)
G109088 NA non-coding upstream 24696 6871511 ~ 6871727 (+)
G109069 NA non-coding upstream 25478 6869600 ~ 6870945 (+)
G109085 NA non-coding upstream 32120 6864063 ~ 6864303 (+)
G109070 NA non-coding upstream 32520 6859672 ~ 6863903 (+)
G109739 NA non-coding downstream 7300 6903970 ~ 6904855 (+)
G109748 NA non-coding downstream 32035 6928705 ~ 6929195 (+)
G109757 NA non-coding downstream 72371 6969041 ~ 6969918 (+)
G109758 NA non-coding downstream 75116 6971786 ~ 6972075 (+)
G109764 LOC106592104 non-coding downstream 100547 6997217 ~ 7090223 (+)
G109020 NA other upstream 262510 6633078 ~ 6633913 (+)
G108874 LOC106573552 other upstream 610483 6282071 ~ 6285940 (+)
G108805 LOC106594197 other upstream 697082 6151712 ~ 6199341 (+)
G108775 LOC106606109 other upstream 838088 6056996 ~ 6058335 (+)
G109821 NA other downstream 238577 7135247 ~ 7140979 (+)
pde11al LOC106573285 other downstream 406358 7282430 ~ 7304709 (+)
creb5b LOC106573409 other downstream 719289 7615910 ~ 7706660 (+)

Expression


Co-expression Network