G109772


Basic Information

Item Value
gene id G109772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6998878 ~ 6999180 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125074
GGCACTGATAATGAGATGAGTGGCATTGAGGAGGGATGGTGTCTGGCTGGAATCACTGAGGAGGGACCGTGTCTGGCTGGAATCACTGAGGAGGGTGGGTGTCTGGCTGGAATCACTGAGGAGGGAGGGTGTCTGGCTGGAATCACTAAGGAGGGACCGTGTTGGGCTGGAGTCCGAATGCTCTAGAAGGTTCAGTATGGCCTGGACTGTCTGCATCTGAGACGCTTCCTTAACCTCCCCCAGGTCAGCTGTCTTACCTGTGCACATCTGGTCCAG
>TU125075
GGCACTGATAATGAGATGAGTGGCATTGAGGAGGGATGGTGTCTGGCTGGAATCACTGAGGAGGGACCGTGTCTGGCTGGAATCACTGAGGAGGGACCGTGTTGGGCTGGAGTCCGAATGCTCTAGAAGGTTCAGTATGGCCTGGACTGTCTGCATCTGAGACGCTTCCTTAACCTCCCCCAGGTCAGCTGTCTTACCTGTGCACATCTGGTCCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125074 False 276 lncRNA 0.34 2 6998878 6999180
TU125075 True 216 lncRNA 0.56 2 6998878 6999180

Neighbor

gene id symbol gene type direction distance location
mpp6a LOC106594438 coding upstream 4163 6944265 ~ 6994715 (+)
LOC110535156 LOC106606167 coding upstream 54835 6941465 ~ 6944043 (+)
stk31 LOC106595692 coding upstream 60128 6912089 ~ 6938750 (+)
malsu1 malsu1 coding upstream 87622 6908511 ~ 6911256 (+)
smpd5 LOC106577403 coding upstream 90678 6897498 ~ 6908200 (+)
LOC110535127 LOC106592104 coding downstream 31445 7030625 ~ 7078975 (+)
LOC110535004 LOC106596209 coding downstream 68103 7067283 ~ 7079077 (+)
pde11al LOC106573285 coding downstream 283250 7282430 ~ 7304709 (+)
cbx3b LOC106573104 coding downstream 359725 7358905 ~ 7369148 (+)
snx10b LOC106593746 coding downstream 370163 7369343 ~ 7377095 (+)
G109758 NA non-coding upstream 26803 6971786 ~ 6972075 (+)
G109757 NA non-coding upstream 28960 6969041 ~ 6969918 (+)
G109748 NA non-coding upstream 69683 6928705 ~ 6929195 (+)
G109739 NA non-coding upstream 94023 6903970 ~ 6904855 (+)
G109738 NA non-coding upstream 102208 6896423 ~ 6896670 (+)
G109782 NA non-coding downstream 38264 7037444 ~ 7037840 (+)
G109783 NA non-coding downstream 50149 7049329 ~ 7050560 (+)
G109787 NA non-coding downstream 55269 7054449 ~ 7079398 (+)
G109792 NA non-coding downstream 65239 7064419 ~ 7064760 (+)
G109793 NA non-coding downstream 71246 7070426 ~ 7071439 (+)
rbm24b LOC106596654 other upstream 129902 6855864 ~ 6868976 (+)
G109020 NA other upstream 364965 6633078 ~ 6633913 (+)
G108874 LOC106573552 other upstream 712938 6282071 ~ 6285940 (+)
G109821 NA other downstream 136067 7135247 ~ 7140979 (+)
creb5b LOC106573409 other downstream 616779 7615910 ~ 7706660 (+)
G110644 NA other downstream 899416 7898596 ~ 7935137 (+)
G110674 NA other downstream 1074186 8073366 ~ 8103920 (+)

Expression


Co-expression Network