G109783


Basic Information

Item Value
gene id G109783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7049329 ~ 7050560 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125086
cctatagtagtagtcctatagtagtagtcctatagtagttGTCCTatagtagtagtcctatagtagtagtcctatagtagccCTAgagtagtagtcctatagtagttGTCCTATAGTAGTTGTCCTATAGTAGTTGTCCTATAGTAGTAGCCCTATAGTAGTAGCCCTATAGTAGTAGCCCTATATaatagtagtcctatagtagtaACCctatagtagtcctatagtagccCTATAGTAGTATCCCTATAGTAGCCCTATAGTAACCCTATAGTAGTTGTCctatagtagtagtactatagtagtaGCCCTATAGTAACCCTATAGTAGGCCTATAGTAGTCATCCTatagtagtagtcctatagtagtaACCTTATAGTAGTAACCCTatagtagtagtcctatagtagtcctatagtagtaGTCCTATAATAGTAGCCCTatagtagtagtcctatagtagtagtcctatagtagtaGCCCTATAGTAGTAACCCTATAGTAGTAGTCATATAGTAACCCTatagtagtagtcctatagtagtaGCCCTATAGTAGTAGCTCTATTGTAGTCCTATAGTAACCCTATAGTAGTAGCACTATAGTCGTAGTATTCCTATAGTAGTATCCCTATAGTAGTAACCCTATAGTAGTAGCCCTATAGCAGTAGTCCTATAGTAGTAGCCTTatagtagtagtcctatagtagtaGCCCTATAGTAGTAACCCTATAGTAGTAACCCTACTATAGCAGTAGCCCTATAGTAGTAGCGCTATATGAGTAGTCCTATAGTAGCCCTatagtagtagtcctatagtagtagtcctatagtagtaTGCCTATAGTAGTATCCCTATAGTAGTAACCTTATAGTAGTAGCcctatagtagtaGCCCTATAGTAGTAACCCTATAGTAGTAGCCCTATAGTAGTAACCCTatagtagtagtcctatagtagtaACCCTatagtagtagtcctatagtagtaGCCCTATAGTAGTAACCCTATAGTAGTAGCCCTATTGTAGTCCTATAGTAACCCTATAGTAGTAGCACTATAGTAGTAGTCATATAGtagtagccacacacacacacacacacacccctacctaactacctacccacctacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125086 True 1134 lncRNA 0.38 2 7049329 7050560

Neighbor

gene id symbol gene type direction distance location
mpp6a LOC106594438 coding upstream 54614 6944265 ~ 6994715 (+)
LOC110535156 LOC106606167 coding upstream 105286 6941465 ~ 6944043 (+)
stk31 LOC106595692 coding upstream 110579 6912089 ~ 6938750 (+)
malsu1 malsu1 coding upstream 138073 6908511 ~ 6911256 (+)
smpd5 LOC106577403 coding upstream 141129 6897498 ~ 6908200 (+)
LOC110535004 LOC106596209 coding downstream 16723 7067283 ~ 7079077 (+)
pde11al LOC106573285 coding downstream 231870 7282430 ~ 7304709 (+)
cbx3b LOC106573104 coding downstream 308345 7358905 ~ 7369148 (+)
snx10b LOC106593746 coding downstream 318783 7369343 ~ 7377095 (+)
tax1bp1b LOC106594183 coding downstream 445623 7496183 ~ 7531274 (+)
G109782 NA non-coding upstream 11489 7037444 ~ 7037840 (+)
G109772 NA non-coding upstream 50149 6998878 ~ 6999180 (+)
G109758 NA non-coding upstream 77254 6971786 ~ 6972075 (+)
G109757 NA non-coding upstream 79411 6969041 ~ 6969918 (+)
G109748 NA non-coding upstream 120134 6928705 ~ 6929195 (+)
G109787 NA non-coding downstream 3889 7054449 ~ 7079398 (+)
G109792 NA non-coding downstream 13859 7064419 ~ 7064760 (+)
G109793 NA non-coding downstream 19866 7070426 ~ 7071439 (+)
G109761 NA non-coding downstream 38732 7089292 ~ 7108061 (+)
G109797 NA non-coding downstream 41866 7092426 ~ 7117995 (+)
rbm24b LOC106596654 other upstream 180353 6855864 ~ 6868976 (+)
G109020 NA other upstream 415416 6633078 ~ 6633913 (+)
G108874 LOC106573552 other upstream 763389 6282071 ~ 6285940 (+)
G109821 NA other downstream 84687 7135247 ~ 7140979 (+)
creb5b LOC106573409 other downstream 565399 7615910 ~ 7706660 (+)
G110644 NA other downstream 848036 7898596 ~ 7935137 (+)
G110674 NA other downstream 1022806 8073366 ~ 8103920 (+)

Expression


Co-expression Network