G109793


Basic Information

Item Value
gene id G109793
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7070426 ~ 7071439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125096
tacgacagagcctgggcacgaacccagggactctgatggcacagctgccgctgcagtacagcagtacagcacccttaaccggGAGGCTCAATCACCTGTTAAATTCAGCTGTGTAGCCTACTATAAACTGCACTGCCTATGTGATTGCATAGCCTACAGCAAAACTTGAAATAAATAGCCTATCTATTTACTAGGCTACTAGGCCAAATTAAATGAGAGATGCGAATGCTAATTTGATGTATGGCTCCTTCAGATACATGAACCCATTACAGCCAGAGAAGGTGAGGAATGTAGTCTGCCATCACGATCATCATAAAATAAATAGGAAATAGATTTCTGTGTCTATTTATACAGTATTAGATTCCAAAAATAAAACACAGATTTTCACTCTTCTCACTAACGGCACATGGCTCCTTTACAATACTTCAACCCCTAGATAGATATTGTGTGTACGTGTGGTCTAAAGTTTGCAGGAAGCAAGTTCAGTTTTTATAAAAGCAAACTTTTGTTGTATATTTAAGTTTATAAATCAGTCCATTTGATTTATAACAGGAAACATGAGTATGTGTGGCATGCGCCAAGTTCATAAATGGCAATATTTGTATAGGTACATATTATTTGGATGTGTCTGTTATAGATATGTGATGGATGTGTCTGTTATAGATATGTGATGGATGTGTCTGTTATAGATATGTGATGGATGTGTCTGTTATAGATATGTGATGGATGTGTCTGTTATAGATATGTGATGGATGTGTCTGTTATAGATATGTGATGGATGTGTCTGTTATAGATATGTGATGGATGTGTCTGTTATAGATATGTGATGGATGTGTCTGCtatagatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaaggtataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125096 True 988 lncRNA 0.37 2 7070426 7071439

Neighbor

gene id symbol gene type direction distance location
mpp6a LOC106594438 coding upstream 75711 6944265 ~ 6994715 (+)
LOC110535156 LOC106606167 coding upstream 126383 6941465 ~ 6944043 (+)
stk31 LOC106595692 coding upstream 131676 6912089 ~ 6938750 (+)
malsu1 malsu1 coding upstream 159170 6908511 ~ 6911256 (+)
smpd5 LOC106577403 coding upstream 162226 6897498 ~ 6908200 (+)
pde11al LOC106573285 coding downstream 210991 7282430 ~ 7304709 (+)
cbx3b LOC106573104 coding downstream 287466 7358905 ~ 7369148 (+)
snx10b LOC106593746 coding downstream 297904 7369343 ~ 7377095 (+)
tax1bp1b LOC106594183 coding downstream 424744 7496183 ~ 7531274 (+)
creb5b LOC106573409 coding downstream 544471 7615910 ~ 7706660 (+)
G109792 NA non-coding upstream 5666 7064419 ~ 7064760 (+)
G109783 NA non-coding upstream 19866 7049329 ~ 7050560 (+)
G109782 NA non-coding upstream 32586 7037444 ~ 7037840 (+)
G109772 NA non-coding upstream 71246 6998878 ~ 6999180 (+)
G109758 NA non-coding upstream 98351 6971786 ~ 6972075 (+)
G109761 NA non-coding downstream 17853 7089292 ~ 7108061 (+)
G109797 NA non-coding downstream 20987 7092426 ~ 7117995 (+)
G109762 LOC106596760 non-coding downstream 32616 7104055 ~ 7105297 (+)
G109766 LOC106592104 non-coding downstream 44989 7116428 ~ 7129520 (+)
G109821 NA non-coding downstream 66960 7135247 ~ 7140979 (+)
rbm24b LOC106596654 other upstream 201450 6855864 ~ 6868976 (+)
G109020 NA other upstream 436513 6633078 ~ 6633913 (+)
G108874 LOC106573552 other upstream 784486 6282071 ~ 6285940 (+)
G110644 NA other downstream 827157 7898596 ~ 7935137 (+)
G110674 NA other downstream 1001927 8073366 ~ 8103920 (+)

Expression


Co-expression Network