Gene
RNA
| Item | Value |
|---|---|
| gene id | G109762 |
| gene name | LOC106596760 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 7104055 ~ 7105297 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: non-syndromic hearing impairment protein 5 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125064 | True | 630 | lncRNA | 0.46 | 2 | 7104055 | 7105297 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535004 | LOC106596209 | coding | upstream | 24978 | 7067283 ~ 7079077 (+) |
| LOC110535127 | LOC106592104 | coding | upstream | 25080 | 7030625 ~ 7078975 (+) |
| mpp6a | LOC106594438 | coding | upstream | 109340 | 6944265 ~ 6994715 (+) |
| LOC110535156 | LOC106606167 | coding | upstream | 160012 | 6941465 ~ 6944043 (+) |
| stk31 | LOC106595692 | coding | upstream | 165305 | 6912089 ~ 6938750 (+) |
| pde11al | LOC106573285 | coding | downstream | 177133 | 7282430 ~ 7304709 (+) |
| cbx3b | LOC106573104 | coding | downstream | 253608 | 7358905 ~ 7369148 (+) |
| snx10b | LOC106593746 | coding | downstream | 264046 | 7369343 ~ 7377095 (+) |
| tax1bp1b | LOC106594183 | coding | downstream | 390886 | 7496183 ~ 7531274 (+) |
| creb5b | LOC106573409 | coding | downstream | 510613 | 7615910 ~ 7706660 (+) |
| G109764 | LOC106592104 | non-coding | upstream | 13832 | 6997217 ~ 7090223 (+) |
| G109787 | NA | non-coding | upstream | 24657 | 7054449 ~ 7079398 (+) |
| G109793 | NA | non-coding | upstream | 32616 | 7070426 ~ 7071439 (+) |
| G109792 | NA | non-coding | upstream | 39295 | 7064419 ~ 7064760 (+) |
| G109783 | NA | non-coding | upstream | 53495 | 7049329 ~ 7050560 (+) |
| G109766 | LOC106592104 | non-coding | downstream | 11131 | 7116428 ~ 7129520 (+) |
| G109821 | NA | non-coding | downstream | 33102 | 7135247 ~ 7140979 (+) |
| G109823 | NA | non-coding | downstream | 35892 | 7141189 ~ 7141711 (+) |
| G109828 | NA | non-coding | downstream | 41404 | 7146701 ~ 7148101 (+) |
| G109834 | NA | non-coding | downstream | 48948 | 7154245 ~ 7155162 (+) |
| malsu1 | malsu1 | other | upstream | 192850 | 6908511 ~ 6911256 (+) |
| rbm24b | LOC106596654 | other | upstream | 235079 | 6855864 ~ 6868976 (+) |
| G109020 | NA | other | upstream | 470142 | 6633078 ~ 6633913 (+) |
| G108874 | LOC106573552 | other | upstream | 818115 | 6282071 ~ 6285940 (+) |
| G110644 | NA | other | downstream | 793299 | 7898596 ~ 7935137 (+) |
| G110674 | NA | other | downstream | 968069 | 8073366 ~ 8103920 (+) |
